DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl2 and Apmap

DIOPT Version :9

Sequence 1:NP_651656.2 Gene:Ssl2 / 43424 FlyBaseID:FBgn0041780 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_082253.1 Gene:Apmap / 71881 MGIID:1919131 Length:415 Species:Mus musculus

Alignment Length:413 Identity:136/413 - (32%)
Similarity:216/413 - (52%) Gaps:50/413 - (12%)


  Fly     1 MGFLAALLKTSLFLVLFLGSLFLLPVLYPSTTFPFEQYFIKPARDLNGTLELNNHLNGARKLWKD 65
            |.||  :|..||.:.| ||::.||.......:|.|     |....:.|.|..|..|..|.:|:::
Mouse    40 MTFL--MLAVSLAIPL-LGAMMLLESPIDPQSFSF-----KEPPFMFGVLHPNTKLRQAERLFEN 96

  Fly    66 QIFGPECLIVLEDKIYTGIHSGEVIRLNNEESVQPITKIGQ-PCDYIFDDELCGYPVGLALDTQG 129
            |:.|||.::.:.|.::||...|.|::|.|.| ::.|.:.|. ||....|:..||.|:|:.....|
Mouse    97 QLSGPESIVNIGDVLFTGTADGRVVKLENGE-IETIARFGSGPCKTRDDEPTCGRPLGIRAGPNG 160

  Fly   130 NNLIVSDAYYGIWQVDLETKKKTVLVPAEQILPGKGANRRAKLFNSLVISRQG-DIFWTDSFSE- 192
             .|.|.|||.|:::|:.:.:...:|:.:|..:.||    :....|.|.::|.| .|::|||.|: 
Mouse   161 -TLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGK----KMSFVNDLTVTRDGRKIYFTDSSSKW 220

  Fly   193 ---DFVFAAF-ANPSGRLFRYDRVKKTNEVLLDELSFANGLALSPSEDFIILAETTAMRLRRYYL 253
               |::.... |...|||..||.|.|..:||||:|.|.||:.|||.|||:::||||..|:||.|:
Mouse   221 QRRDYLLLVMEATDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSPEEDFVLVAETTMARIRRVYV 285

  Fly   254 KGSRAGESEVFVEGLPGCPDNL-TADEEGIWVPLSVASDSQNPNLFAVLAPYPRLRSFLARLVAL 317
            .|...|.:::|||.:||.|||: .:...|.||  :.|:...||. |::|       .||:....:
Mouse   286 SGLMKGGADMFVENMPGFPDNIRPSSSGGYWV--AAATIRANPG-FSML-------DFLSDKPFI 340

  Fly   318 MRLPLRVLNHIYPNDIAARLFHSFN-DLVIRNAPKRSTVVRVDWNGNIVRSLHGFD-RSASGISH 380
            .|:                :|..|: :.|::..|:.|.|:.|..:|...||||..| :..:.:|.
Mouse   341 KRM----------------IFKMFSQETVMKFVPRYSLVLEVSDSGAFRRSLHDPDGQVVTYVSE 389

  Fly   381 VLEVKGHLYLGSPFNHYVAKVKL 403
            ..|..|:|||||..:.::.::.|
Mouse   390 AHEHDGYLYLGSFRSPFICRLSL 412

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Ssl2NP_651656.2 YvrE 80..>284 CDD:225921 79/211 (37%)
Str_synth 174..256 CDD:304606 40/87 (46%)
ApmapNP_082253.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29
YvrE 72..>319 CDD:225921 93/254 (37%)
NHL 95..>283 CDD:302697 71/193 (37%)
NHL repeat 101..136 CDD:271320 11/35 (31%)
NHL repeat 151..189 CDD:271320 11/38 (29%)
NHL repeat 199..247 CDD:271320 17/47 (36%)
Str_synth 200..287 CDD:304606 40/86 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850679
Domainoid 1 1.000 77 1.000 Domainoid score I8836
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 176 1.000 Inparanoid score I4039
Isobase 1 0.950 - 0 Normalized mean entropy S5287
OMA 1 1.010 - - QHG48544
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001350
OrthoInspector 1 1.000 - - otm42684
orthoMCL 1 0.900 - - OOG6_101875
Panther 1 1.100 - - O PTHR10426
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3581
SonicParanoid 1 1.000 - - X608
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.880

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