DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssl2 and T12G3.4

DIOPT Version :10

Sequence 1:NP_651656.2 Gene:Ssl2 / 43424 FlyBaseID:FBgn0041780 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_502282.1 Gene:T12G3.4 / 178141 WormBaseID:WBGene00011739 Length:447 Species:Caenorhabditis elegans


Alignment Length:436 Identity:120/436 - (27%)
Similarity:196/436 - (44%) Gaps:66/436 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LAALLKTSLFLVL-FLGSLFLLPVL------YPSTTFPFEQYFIKPARDLNGTLELNNHLNGARK 61
            |..|..|.:.:|| .||||.:..:|      .|.....|:   :.....|.|.|.:|..|..|..
 Worm    42 LRILGSTPVKIVLGLLGSLIIAGLLTNRIINAPIKAVEFD---LGDKIPLEGVLAVNKRLTDAEL 103

  Fly    62 LWKDQIFGPECLIVLE--DKIYTGIHSGEVIRLNNEESVQPITKIGQ------PCDYIFDD-ELC 117
            |..||::|||.|::.|  .|:|.|..:|.:..::.:|..:.|....|      .||..:.. .||
 Worm   104 LLVDQVYGPESLVLDEKNSKLYAGFKTGIIAEIDMKEGREKIVHAVQLAQGNHDCDGSYKKMNLC 168

  Fly   118 GYPVGLALDTQGNNLIVSDAYYGIWQVDLETKKKTVLVPAEQILPGKGANRR-AKLFNSLVISRQ 181
            |.|:||.|...| .|:::|||.|::.::.:.:|...::.|.: ||....|.. .|..|.|.|...
 Worm   169 GRPLGLRLSDVG-ELVIADAYLGLFAINWQEEKVVKILGAGE-LPANNENAAPIKYLNDLDILPD 231

  Fly   182 GDIFWTDSFSE----DFVFAAFAN-PSGRLFRYDRVKKTNEVLLDELSFANGLALSPSEDF---- 237
            |.:.:|:|.::    ||:...|.: |:|||..||..||...||.|.|.|.||:.||..:..    
 Worm   232 GRVIFTESSTKFDDRDFILDLFEHRPNGRLLIYDPRKKDLRVLKDGLYFPNGVQLSIEKGMGKNA 296

  Fly   238 ---IILAETTAMRLRRYYLKGSRAGESEV----FVEGLPGCPDNLTADEEG-IWVPLSVASDSQN 294
               ::.:|....|:.:.::.......:.|    .:|.|||.|||:...:.| :.:|  :||....
 Worm   297 PWRVLYSEMGLARVMQIWVPRDHYSTAPVKTSPLIENLPGYPDNIRLTKSGHLLIP--IASHRSE 359

  Fly   295 PNLFAVLAPYPRLRSFLARLVALMRLPLRVLNHIYPNDIAARLFHSFNDLVIRNAPKRSTVVRVD 359
            .:.|  |...|.:|.|:.::::...|.. |.|::                    |.....|::|:
 Worm   360 EDRF--LEQNPSVREFITKILSPQALGY-VANYV--------------------ADVEGLVIKVN 401

  Fly   360 W-NGNIVRSLHGFDRSASGISHVL-EVKGHLYLGSPFNHYVAKVKL 403
            . .|.|:.|.|........:|..: :.||.:.|||..|:|:|:.||
 Worm   402 TETGQIIESYHDQTGRVEAVSIAIDDGKGRMLLGSDVNYYIARAKL 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ssl2NP_651656.2 YvrE 61..>284 CDD:442613 73/249 (29%)
T12G3.4NP_502282.1 YvrE 112..>351 CDD:442613 69/240 (29%)
Str_synth 224..315 CDD:354965 28/90 (31%)

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