Protein Alignment CG1523 and CAF4

DIOPT Version :10

• Sequence 1: NP_651635.2
• Gene: CG1523 / 43400
• FlyBaseID: FBgn0039601
• Length: 621
• Species: Drosophila melanogaster
• Sequence 2: NP_012962.3
• Gene: CAF4 / 853908
• SGDID: S000001744
• Length: 643
• Species: Saccharomyces cerevisiae
• Alignment Length: 181
• Identity: 44/181 - (24%)
• Similarity: 77/181 - (42%)
• Gaps: 44/181 - (24%)

  Fly    19 DNSLMRRIYSSMNMFNSYHANCWPTDAGRTGAIFNLEFNA--------DGNVVVAA--------- 66
            |.:|.|.||...:....      .|:...|..|.|.|.:.        |...:|:.
Yeast   391 DLNLSREIYLDHSPLKE------KTEEIVTPCIHNFELHKDEITALSFDSEALVSGSRDKKIFHW 449

  Fly    67 --TERKCVLVFDAI---TQKEIFKVPDAHTDSVNC-----------IKFFDERLFATGSDDFTVA 115
              |..||:...|.|   |..:| |:|....::..|           ::.::..| |||:.|..|.
Yeast   450 DLTTGKCIQQLDLIFTPTHSDI-KMPARSLNNGACLLGTEAPMIGALQCYNSAL-ATGTKDGIVR 512

  Fly   116 LWDLRNMKQKLRVLHGHSNWVKNIEYSSKDKLLVSSGFDGSIFTWDINSQT 166
            ||||| :.:.:|:|.||::.:.::::.|:.  ||:...|.|:..||:.:.:
Yeast   513 LWDLR-VGKPVRLLEGHTDGITSLKFDSEK--LVTGSMDNSVRIWDLRTSS 560

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG1523	NP_651635.2	WD40	<46..>212	CDD:441893	38/154 (25%)
		WD40 repeat	51..87	CDD:293791	13/57 (23%)
		WD40 repeat	95..129	CDD:293791	13/44 (30%)
		WD40 repeat	136..174	CDD:293791	7/31 (23%)
		WD40 repeat	181..210	CDD:293791
CAF4	NP_012962.3	Mdv1_N	83..233	CDD:467856
		WD40	318..641	CDD:238121	44/181 (24%)
		WD40 repeat	322..360	CDD:293791
		WD40 repeat	366..422	CDD:293791	9/36 (25%)
		WD40 repeat	427..461	CDD:293791	5/33 (15%)
		WD40 repeat	472..526	CDD:293791	15/55 (27%)
		WD40 repeat	532..563	CDD:293791	7/31 (23%)
		WD40 repeat	571..611	CDD:293791
		WD40 repeat	617..641	CDD:293791