DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1523 and MDV1

DIOPT Version :10

Sequence 1:NP_651635.2 Gene:CG1523 / 43400 FlyBaseID:FBgn0039601 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_012423.1 Gene:MDV1 / 853332 SGDID:S000003648 Length:714 Species:Saccharomyces cerevisiae


Alignment Length:268 Identity:56/268 - (20%)
Similarity:96/268 - (35%) Gaps:107/268 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 WPTDAGRTGAIFNLEFNADGNVVVAATE---RKCVLVFDAITQKEIFKVPDAHTDSVNCIKFFDE 102
            |...:|:.....:|.|   .||:..:|.   .|..|    :||:.       ...|:..::.||.
Yeast   527 WDLRSGKCLQTIDLSF---ANVLTTSTNVDLSKSTL----LTQRN-------ERPSIGALQSFDA 577

  Fly   103 RLFATGSDDFTVALWDLRNMKQKLRVLHGHSNWVKNIEYSSKDKLLVSSGFDGSIFTWDINSQTE 167
            .| |||:.|..|.|||||:.| .:|.|.||::.:.::::.|  ..||:..:|.::..||:.:   
Yeast   578 AL-ATGTKDGVVRLWDLRSGK-VIRTLKGHTDAITSLKFDS--ACLVTGSYDRTVRIWDLRT--- 635

  Fly   168 QGLISQRVFHASGLMRCRISPTGDKLVLCTSGGYIMIIHHLDLTTLHKDLCGFRPGIYRLMQLGE 232
             ||:::  |||                      |...:..|||.                     
Yeast   636 -GLLNK--FHA----------------------YSAPVLSLDLF--------------------- 654

  Fly   233 QYIPQAAKYDHVFSKRQKKNRVELVTDFPENNDAEMIMALQIHPHCCCMLTRNVSCDEQSEWTCI 297
                             ::|...:|.|.|         ::||:           ..::...|:|:
Yeast   655 -----------------QENAAVVVADEP---------SVQIY-----------DSEKDESWSCV 682

  Fly   298 HDINEEPV 305
            ...||..|
Yeast   683 EQGNETSV 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1523NP_651635.2 WD40 <46..>212 CDD:441893 44/168 (26%)
WD40 repeat 51..87 CDD:293791 9/38 (24%)
WD40 repeat 95..129 CDD:293791 15/33 (45%)
WD40 repeat 136..174 CDD:293791 8/37 (22%)
WD40 repeat 181..210 CDD:293791 2/28 (7%)
MDV1NP_012423.1 Mdv1_N 97..298 CDD:467856
Mdv1 123..171 CDD:402923
WD40 397..713 CDD:238121 56/268 (21%)
WD40 repeat 402..439 CDD:293791
WD40 repeat 444..499 CDD:293791
WD40 repeat 506..539 CDD:293791 2/11 (18%)
WD40 repeat 546..603 CDD:293791 21/69 (30%)
WD40 repeat 648..683 CDD:293791 11/92 (12%)
WD40 repeat 690..712 CDD:293791 1/1 (100%)
Blue background indicates that the domain is not in the aligned region.

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