DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1523 and AT1G24130

DIOPT Version :10

Sequence 1:NP_651635.2 Gene:CG1523 / 43400 FlyBaseID:FBgn0039601 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_173823.1 Gene:AT1G24130 / 839025 AraportID:AT1G24130 Length:415 Species:Arabidopsis thaliana


Alignment Length:257 Identity:63/257 - (24%)
Similarity:105/257 - (40%) Gaps:41/257 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NSLMRRIYSSMNMFNSY-----HANCWPTDAGRTGAIFNLEFNADGNVVVAATERKCVLVFDAIT 79
            |...:.::||    .||     |..|  |......|:.:|..:.||:::.:|:..:...::....
plant   165 NDRFKTLFSS----KSYVEVRRHKKC--TWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSD 223

  Fly    80 QKEIFKVPDAHTDSVNCIKFFDERLFATGSDDFTVALWDLRNMKQKL-RVLHGHSNWVKNIEYSS 143
            .|.:..:..||.|::|.|....:....|||.|..:.:|:.::.|..| ..|..|.:.|..:..|.
plant   224 FKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISE 288

  Fly   144 KDKLLVSSGFDGSIFTWD--INSQTEQGLISQRVFHAS--GLMRCRISPTGDKLVLCTSGGYIMI 204
            ..|:|.|...|.||..|:  ||...|:       .|.|  |.:|..     .|.::|     :.:
plant   289 DGKVLYSGACDRSILVWERLINGDDEE-------LHMSVVGALRGH-----RKAIMC-----LAV 336

  Fly   205 IHHLDLT-TLHKDLCGFRPGIYRLMQLGEQYIPQAAKYDHVFSKRQKKNRVELVTDFPENND 265
            ...|.|: :..|.|..:|.|   ||: .|.|...|....|.   :..|:....|:|...|:|
plant   337 ASDLVLSGSADKSLRVWRRG---LME-KEGYSCLAVLEGHT---KPVKSLAVSVSDSDSNSD 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1523NP_651635.2 WD40 <46..>212 CDD:441893 40/171 (23%)
WD40 repeat 51..87 CDD:293791 5/35 (14%)
WD40 repeat 95..129 CDD:293791 9/34 (26%)
WD40 repeat 136..174 CDD:293791 12/39 (31%)
WD40 repeat 181..210 CDD:293791 4/28 (14%)
AT1G24130NP_173823.1 WD40 61..409 CDD:238121 63/257 (25%)
WD40 repeat 73..115 CDD:293791
WD40 repeat 120..162 CDD:293791
WD40 repeat 196..231 CDD:293791 5/34 (15%)
WD40 repeat 238..273 CDD:293791 9/34 (26%)
WD40 repeat 281..325 CDD:293791 15/50 (30%)
WD40 repeat 331..353 CDD:293791 5/26 (19%)
Blue background indicates that the domain is not in the aligned region.

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