DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1523 and AT3G51930

DIOPT Version :10

Sequence 1:NP_651635.2 Gene:CG1523 / 43400 FlyBaseID:FBgn0039601 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_190761.1 Gene:AT3G51930 / 824356 AraportID:AT3G51930 Length:415 Species:Arabidopsis thaliana


Alignment Length:155 Identity:39/155 - (25%)
Similarity:67/155 - (43%) Gaps:15/155 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RRIYSSMNMFNSYHANCWPTDAGRTGAIFN-LEFNADGNVVVAATERKCVLVFDAITQKEIFK-- 85
            ::|.|:.:..:|.|. ...|..||.....| :..:.|||.|........|:.::...::..|:  
plant   245 KQIESTSSSSSSLHV-LKATLEGRAEVSVNSVVVSGDGNWVYGGGSDGFVIGWEKKEKEGDFEEW 308

  Fly    86 ----VPDAHTDSVNCIKFFDERLFATGSDDFTVALW--DLRNMKQKLRVLHGHSNWVKNIEYSSK 144
                ....|..:|.|:....| :..:||.|.::.||  ::..|..|..|:|||...||.::.|..
plant   309 RLGFETRGHNMAVLCMCVVGE-MVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPVKCLQASPN 372

  Fly   145 DK----LLVSSGFDGSIFTWDINSQ 165
            :.    :|.|.|.|.|:..|.:..|
plant   373 NVGAGFMLYSGGLDKSLRVWWVPKQ 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1523NP_651635.2 WD40 <46..>212 CDD:441893 34/133 (26%)
WD40 repeat 51..87 CDD:293791 7/42 (17%)
WD40 repeat 95..129 CDD:293791 9/35 (26%)
WD40 repeat 136..174 CDD:293791 10/34 (29%)
WD40 repeat 181..210 CDD:293791
AT3G51930NP_190761.1 WD40 53..392 CDD:475233 37/148 (25%)
WD40 repeat 105..145 CDD:293791
WD40 repeat 178..211 CDD:293791
WD40 repeat 217..265 CDD:293791 5/20 (25%)
WD40 repeat 272..314 CDD:293791 7/41 (17%)
WD40 repeat 321..343 CDD:293791 6/22 (27%)
Blue background indicates that the domain is not in the aligned region.

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