| Sequence 1: | NP_651635.2 | Gene: | CG1523 / 43400 | FlyBaseID: | FBgn0039601 | Length: | 621 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_076469.1 | Gene: | Apaf1 / 78963 | RGDID: | 620575 | Length: | 1249 | Species: | Rattus norvegicus |
| Alignment Length: | 709 | Identity: | 143/709 - (20%) |
|---|---|---|---|
| Similarity: | 241/709 - (33%) | Gaps: | 251/709 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 36 YHANCWPTD--------AGRTGAIFNLE-------------------FNADGNVVVAATERKCVL 73
Fly 74 VFDAITQKEIFKVPDAHTDSVNCIKFFDER---LFATGSDDFTVALWDLRNMKQKLRVLHGHSNW 135
Fly 136 VKNIEYSSKDKLLVSSGFDGSIFTWDINSQTEQGLISQRVFHASG----------LMRCRISPTG 190
Fly 191 DKLVLCTSGGYIMIIHHLD--LTTLHK------DLCGFRPGIYRLMQLGEQYIPQAAKYDHVFSK 247
Fly 248 RQKKNRVELVTDFPENNDAEMIMALQIHPHCCCMLTRNVSCDEQSEWTCIHDINEEP-----VRS 307
Fly 308 EDEQDEVEPQPKRKRVSTTLASRSSLNESQDQDTV---------------------GLTPRQARR 351
Fly 352 P-LRVS------------------SVQVFQLDN-----SGAG--------RGASDNPSVLTRSDS 384
Fly 385 FIPDIWAAEVTVQERAIRQNRARVSNNHVSGYNFVYAISSGVLPLRQLGANSLMGSSTS------ 443
Fly 444 -------PRPLTTPPPTESNQSSSSSSSSSSSSSSSSSSNNSDTTVRLEIGNRLRLRSFNSPVTT 501
Fly 502 PTFKENGHSILVNAKKLLYYAAETNTKPGFIKEPGFSADGRVVCSPYGNG-VRLFGYSEDCCDYP 565
Fly 566 KCQAFEEVKSKPRKLVELA---KITE----HQDVVLCAKFSPREPLLVTGCNGGEVTWY 617 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG1523 | NP_651635.2 | WD40 | <46..>212 | CDD:441893 | 51/199 (26%) |
| WD40 repeat | 51..87 | CDD:293791 | 9/54 (17%) | ||
| WD40 repeat | 95..129 | CDD:293791 | 15/36 (42%) | ||
| WD40 repeat | 136..174 | CDD:293791 | 13/37 (35%) | ||
| WD40 repeat | 181..210 | CDD:293791 | 5/30 (17%) | ||
| Apaf1 | NP_076469.1 | CARD_APAF1 | 7..92 | CDD:260034 | |
| NB-ARC | 129..374 | CDD:395745 | |||
| APAF1_C | 453..587 | CDD:465560 | |||
| WD40 | <608..912 | CDD:441893 | 77/336 (23%) | ||
| WD 1-1 | 613..652 | 9/33 (27%) | |||
| WD40 repeat | 623..655 | CDD:293791 | 5/31 (16%) | ||
| WD 1-2 | 655..694 | 7/39 (18%) | |||
| WD40 repeat | 661..697 | CDD:293791 | 7/36 (19%) | ||
| WD 1-3 | 697..738 | 17/41 (41%) | |||
| WD40 repeat | 702..740 | CDD:293791 | 16/38 (42%) | ||
| WD 1-4 | 741..780 | 15/38 (39%) | |||
| WD40 repeat | 747..789 | CDD:293791 | 13/41 (32%) | ||
| WD 1-5 | 796..837 | 7/40 (18%) | |||
| WD40 repeat | 801..837 | CDD:293791 | 7/35 (20%) | ||
| WD40 | 805..1235 | CDD:441893 | 91/520 (18%) | ||
| WD 1-6 | 838..877 | 12/76 (16%) | |||
| WD40 repeat | 843..882 | CDD:293791 | 13/76 (17%) | ||
| WD 1-7 | 880..910 | 5/32 (16%) | |||
| WD40 repeat | 885..909 | CDD:293791 | 4/24 (17%) | ||
| Interpropeller linker. /evidence=ECO:0000250 | 910..921 | 3/15 (20%) | |||
| WD 2-1 | 922..958 | 5/35 (14%) | |||
| WD 2-2 | 959..998 | 5/38 (13%) | |||
| WD40 repeat | 964..1001 | CDD:293791 | 6/36 (17%) | ||
| WD 2-3 | 1001..1040 | 6/57 (11%) | |||
| WD40 repeat | 1006..1030 | CDD:293791 | 2/23 (9%) | ||
| WD 2-4 | 1042..1080 | 6/37 (16%) | |||
| WD40 repeat | 1048..1082 | CDD:293791 | 5/33 (15%) | ||
| WD 2-5 | 1083..1122 | 11/55 (20%) | |||
| WD40 repeat | 1089..1124 | CDD:293791 | 11/44 (25%) | ||
| WD 2-6 | 1125..1164 | 12/75 (16%) | |||
| WD40 repeat | 1130..1174 | CDD:293791 | 13/80 (16%) | ||
| WD 2-7 | 1176..1213 | 10/30 (33%) | |||
| WD40 repeat | 1181..1203 | CDD:293791 | 8/23 (35%) | ||
| WD 2-8 | 1214..1249 | ||||
| Blue background indicates that the domain is not in the aligned region. | |||||