DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1523 and Wdsub1

DIOPT Version :10

Sequence 1:NP_651635.2 Gene:CG1523 / 43400 FlyBaseID:FBgn0039601 Length:621 Species:Drosophila melanogaster
Sequence 2:NP_001366327.1 Gene:Wdsub1 / 72137 MGIID:1919387 Length:475 Species:Mus musculus


Alignment Length:271 Identity:56/271 - (20%)
Similarity:88/271 - (32%) Gaps:88/271 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RIYS---------SMNMFNSYHANC---------------------WPTDAGRTGAIFNLE---- 55
            |:||         |...|::|..:|                     |.:.:|.|..:  ||    
Mouse    35 RLYSLSDFAELPYSPLKFHTYAVHCCCFSPSGHVLASCSTDGTTVLWSSHSGHTLTV--LEQPGG 97

  Fly    56 -------FNADGNVVVAATERKCVLVFDAITQKEIFKVPDAHTDS-VNCIKFFDERLFATGSDDF 112
                   |:.|...:.:......:.:::|.|.| :::.......| |.|....|..||.|||...
Mouse    98 SPVRVCCFSPDSAYLASGAADGSIALWNAQTYK-LYRCGSVKDSSLVACAFSPDGGLFVTGSSGG 161

  Fly   113 TVALWDLRNMKQKLRVLH---GHSNWVKNIEYSS---------KDKLLVSSGFDGSIFTWDIN-- 163
            .:.:||     .::|.||   .|...:....:||         :...|.|.|.|..|..|.:.  
Mouse   162 DLTVWD-----DRMRCLHSEKAHDLGITCCSFSSQPLSGGEGLQSYQLASCGQDCEIKLWAVTIT 221

  Fly   164 ---------SQTEQGLISQRVFHASGLMRCRISPTG--------DKLVLCTSGGYIMIIHHLDLT 211
                     ..|..|       |.:.::.|..|..|        ||.|:....|...::|.|...
Mouse   222 RVLGFELKYKSTLSG-------HCAPVLACAFSHDGKMLASGSVDKSVIIHGIGPQSVLHTLTQH 279

  Fly   212 TLHKDLCGFRP 222
            |.:...|.|.|
Mouse   280 TRYVTTCAFAP 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1523NP_651635.2 WD40 <46..>212 CDD:441893 44/208 (21%)
WD40 repeat 51..87 CDD:293791 7/46 (15%)
WD40 repeat 95..129 CDD:293791 10/33 (30%)
WD40 repeat 136..174 CDD:293791 10/57 (18%)
WD40 repeat 181..210 CDD:293791 9/36 (25%)
Wdsub1NP_001366327.1 WD40 <3..310 CDD:441893 56/271 (21%)
WD 1 10..47 3/11 (27%)
WD40 repeat 16..52 CDD:293791 4/16 (25%)
WD 2 52..91 6/38 (16%)
WD40 repeat 57..93 CDD:293791 4/37 (11%)
WD 3 95..134 5/39 (13%)
WD40 repeat 101..136 CDD:293791 5/35 (14%)
WD 4 137..176 14/43 (33%)
WD40 repeat 143..177 CDD:293791 13/38 (34%)
WD 5 178..227 9/48 (19%)
WD40 repeat 183..235 CDD:293791 9/51 (18%)
WD 6 236..275 9/45 (20%)
WD40 repeat 241..264 CDD:293791 6/22 (27%)
WD40 repeat 283..307 CDD:293791 3/8 (38%)
SAM_WDSUB1 327..398 CDD:188904
U-box 403..475 CDD:398320
Blue background indicates that the domain is not in the aligned region.

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