DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1523 and Rbcn-3B

DIOPT Version :10

Sequence 1:NP_651635.2 Gene:CG1523 / 43400 FlyBaseID:FBgn0039601 Length:621 Species:Drosophila melanogaster
Sequence 2:XP_061518785.1 Gene:Rbcn-3B / 3291629 VectorBaseID:AGAMI1_004638 Length:1473 Species:Anopheles gambiae


Alignment Length:646 Identity:129/646 - (19%)
Similarity:217/646 - (33%) Gaps:189/646 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PDAHTDSVNCIKFF--DERLFATGSDDFTVALW----DLRNMKQKLRVLHGHSNWVKNIEYSS-- 143
            |:..|..|:.: |.  |:::.|||..|..:.||    |...|..:. :|.||:..|..:..:|  
Mosquito    15 PNTPTHCVSSV-FLSRDQKILATGCYDGQICLWQVDPDTLQMTPRC-LLVGHTAPVLCLTRASII 77

  Fly   144 -KDKLLVSSGFDGSIFTWDI--NSQTEQGLISQ-----RVFHASGLMRCRISPTGDKLVLCTSGG 200
             .:..||||..:|.:.|||:  ...||...:.|     :.:|   :..|      |.:.|..:|.
Mosquito    78 QDNNFLVSSSENGEMCTWDLVDGKCTESIKMPQVHTNIQAYH---MANC------DDIRLFCNGY 133

  Fly   201 Y--IMIIHHLDLTTLHKDLCGFRPGIYRLMQLGEQYIPQAAKYDHVFSKRQKKNRVELV------ 257
            |  ||::....|..|   .|           |..:..|......||....::|:.|.|.      
Mosquito   134 YAEIMVMDPFSLEVL---FC-----------LSSKVNPDWISALHVLRPSKRKDDVVLAITTTGT 184

  Fly   258 ----------TDFPE---NNDAEMIMALQ-IHPHCCCMLTRNVSCDEQSEWTCIHDINEEPVRSE 308
                      ..:.|   .|:::.|..|. |..:||....|.|.......|. |:|..:..|.. 
Mosquito   185 VKVWTLLGNENKYSEPIYENESKQIRCLNAITMNCCSQNQRTVLIVCAKYWQ-IYDAGDFTVLC- 247

  Fly   309 DEQDEVEPQPKRKRVSTTLAS------------------RSSLNESQD-------QDTVGL---T 345
               ..:.|..:|......|::                  .:|:.:::|       :||..|   .
Mosquito   248 ---SVISPSGERWMGGDFLSNDRVILWSDEGKGYLFRLPANSIPDNKDFHGPSVGKDTPFLYCIL 309

  Fly   346 PRQARRPLRV-SSVQVFQLDNSGAGRGASDNPSVLTRSDS--FIPDIWAA---------EVTVQE 398
            .:...:||.. .::::...:.||      .....|.|.||  :: :|||.         ::..|:
Mosquito   310 SQTGEKPLSCPPTMKLVTSNRSG------KTQKYLLRGDSEGYV-NIWAVPDISMEQIKQIQTQK 367

  Fly   399 RAIRQNRARVSNNHVSGYNFVYAISSGVLPLRQLGANS-----LMGSSTSPR-----------PL 447
            :......:.:..:.:..:|.:..:..|:|.  ||..||     |..|...|:           .:
Mosquito   368 QHPASLESTICTSLLEAWNKMNPLPVGILD--QLYQNSEPMIKLTASIYLPQQSRLVVGREDGSI 430

  Fly   448 TTPPPTESNQSSSSSSSSSSSSSSSSSSNNSDTTVRLEI--GNRLRLRSFNSPVTTPTFKENGHS 510
            ...|.|:                          ||.|.:  ||..:...:     .|....||||
Mosquito   431 IIVPATQ--------------------------TVMLHLLHGNHQQFSDW-----PPHQILNGHS 464

  Fly   511 ILVNAKKLLYYAAETNTKPGFIKEPG--FSA------DGRVV---CSPYGNGVRLFGYSEDC--- 561
            ..||. .|....|.:......:...|  |:.      .|.::   |...|...:|......|   
Mosquito   465 GRVNC-LLCPSLAHSRYDKSHLVSGGVDFAVCLWDLYSGSLIHRFCVHAGEITQLLVPPPTCSPR 528

  Fly   562 -----CDYPKCQAFEEVKSKPRKLVELAKITEHQDVVLCAKFSPREPLLVTGCNGGEV-TW 616
                 |......:...:..:.||.|.||  :.|...|:..|:.|.:..|:.||:.|.| .|
Mosquito   529 ILKCICSVASDHSVTLLSLQERKCVTLA--SRHLFPVISIKWRPLDDFLIVGCSDGTVYVW 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1523NP_651635.2 WD40 <46..>212 CDD:441893 38/142 (27%)
WD40 repeat 51..87 CDD:293791 129/646 (20%)
WD40 repeat 95..129 CDD:293791 10/39 (26%)
WD40 repeat 136..174 CDD:293791 13/47 (28%)
WD40 repeat 181..210 CDD:293791 7/30 (23%)
Rbcn-3BXP_061518785.1 None

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