DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or98b and Orco

DIOPT Version :10

Sequence 1:NP_524540.4 Gene:Or98b / 43375 FlyBaseID:FBgn0039582 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_524235.2 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster


Alignment Length:450 Identity:85/450 - (18%)
Similarity:152/450 - (33%) Gaps:128/450 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FMPLTIAFGLQNVQ-NVEQLTDSLCSVLVDLLALCKIGLFLWLYKDFKFLIGQFYCVL----QTE 104
            |:.:...|.|.|:. |.|::.:...:.:..|.....|..|::|..:.|    .||..|    |..
  Fly    52 FLLMQFTFILVNMALNAEEVNELSGNTITTLFFTHCITKFIYLAVNQK----NFYRTLNIWNQVN 112

  Fly   105 THTAVAE------MIVTRESRRDQFISAMYAYCFITAGLSACLM-SPLSMLISYQRTGELQ---P 159
            ||...||      .|...:.|:..|:..:......||..:.... ..:.|::.::....:.   |
  Fly   113 THPLFAESDARYHSIALAKMRKLFFLVMLTTVASATAWTTITFFGDSVKMVVDHETNSSIPVEIP 177

  Fly   160 KFPFPSVYPWDNMKLSNYIISYFWNVCAALGVALPTVCVDTLFCS--------LSH--------- 207
            :.|..|.|||:......|:||:.:.:...|...:.:...|.:|||        |.|         
  Fly   178 RLPIKSFYPWNASHGMFYMISFAFQIYYVLFSMIHSNLCDVMFCSWLIFACEQLQHLKGIMKPLM 242

  Fly   208 -----------NLCALFQI----ARHKMMHFE--------------------------------- 224
                       |..|||:.    ::.:::|.|                                 
  Fly   243 ELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGTDMDMSGIYSSKADWGAQFRAPSTLQSF 307

  Fly   225 ------------GRN----TKETH-----------ENLKHVFQLYALCLNLGHFLNEYFRPLICQ 262
                        |.|    ||:..           |..|||.:|.|.   :|   :.|...|:..
  Fly   308 GGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERHKHVVRLVAA---IG---DTYGAALLLH 366

  Fly   263 FVAASLHLCVLCYQLS----ANILQPALLFYAAFTAAVVGQVSIYCFCGSSIHSECQLFGQAIYE 323
            .:.:::.|.:|.||.:    .|:....::.|..:..|   ||..:|..|:.:..|.....:|.|.
  Fly   367 MLTSTIKLTLLAYQATKINGVNVYAFTVVGYLGYALA---QVFHFCIFGNRLIEESSSVMEAAYS 428

  Fly   324 SSWPHLLQENLQLVSSLKIAMMRSSLGCPIDG-YFFEANRETLITIVRTAISYVTLLRSL 382
            ..|....:|....|   :|...:......|.| .||..:.:...:::...::|..:|..|
  Fly   429 CHWYDGSEEAKTFV---QIVCQQCQKAMSISGAKFFTVSLDLFASVLGAVVTYFMVLVQL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or98bNP_524540.4 7tm_6 59..372 CDD:251636 78/423 (18%)
OrcoNP_524235.2 7tm_6 70..472 CDD:251636 76/417 (18%)

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