DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mtl and rhoaa

DIOPT Version :10

Sequence 1:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster
Sequence 2:NP_998302.1 Gene:rhoaa / 406411 ZFINID:ZDB-GENE-040426-2150 Length:193 Species:Danio rerio


Alignment Length:190 Identity:106/190 - (55%)
Similarity:135/190 - (71%) Gaps:5/190 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDRLRP 72
            |.|:||||..||||:||.::.|.||..||||||:||.|.::||:.||.|.|||||||||||||||
Zfish     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRP 71

  Fly    73 LSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLAEQGL 137
            ||||.|||.|:|:|:.||.|.||:..||.||:||.||:.||||||.|.|||.|..|...|.:...
Zfish    72 LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELQKMKQ 136

  Fly   138 TPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQRK--CLIM 195
            .|:|.|:|:.:||:|.|..|:||||.|:.|::.|||.|.||.|:   .|:|.:|  |.::
Zfish   137 EPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFEMATRAALQ---AKKRGKKNACALL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MtlNP_524533.1 RHO 9..182 CDD:197554 101/172 (59%)
rhoaaNP_998302.1 RhoA_like 5..179 CDD:206662 101/171 (59%)

Return to query results.
Submit another query.