DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and TLP1

DIOPT Version :10

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_177816.1 Gene:TLP1 / 844025 AraportID:AT1G76900 Length:455 Species:Arabidopsis thaliana


Alignment Length:521 Identity:112/521 - (21%)
Similarity:173/521 - (33%) Gaps:186/521 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1017 SLDSCDLLSLQTKLSS--KE------------HEQVVRKLQEISDSSACSSAANTLCFKCRNNMS 1067
            |:.|....|...||||  ||            .||:|..:||...:                |:.
plant    13 SIGSLSRRSFDFKLSSLNKEGGKSRGSVQDSHEEQLVVTIQETPWA----------------NLP 61

  Fly  1068 PS---SACKRCQPSASSVLDEITAVVPAVEPAKESPAVQAKPAPKKRFDVITSFTDSPLFTRKHR 1129
            |.   ...||.:.|.|            |.||:......|......| |:......||..:.|..
plant    62 PELLRDVIKRLEESES------------VWPARRHVVACASVCRSWR-DMCKEIVQSPELSGKIT 113

  Fly  1130 FGIGRSKETAGTENSTPLLGRKQDNG---FSFVKQLSEVRWRRKEQPAQAQVNGS--SNASTLER 1189
            |.:  |.:..|..::|.....|:|..   :.....||         ||....||.  .:|..:.|
plant   114 FPV--SLKQPGPRDATMQCFIKRDKSNLTYHLYLCLS---------PALLVENGKFLLSAKRIRR 167

  Fly  1190 QPQPEITGAACGTVEATPVEAKASVSLHTQALTTLEN-IISRLRDLDEGRL-----TPPSTPQRL 1248
            ....|..                 :|:|...::...| .|.::|....|..     |.|:....:
plant   168 TTYTEYV-----------------ISMHADTISRSSNTYIGKIRSNFLGTKFIIYDTQPAYNSNI 215

  Fly  1249 PRS---------------SPASPAASKKNKRQQSNSPIRHILNSPLLNRRQRKK-----QSIIES 1293
            .|:               ||..|:.|.|      .:.:.:.||  :|..|..::     .||..|
plant   216 ARAVQPVGLSRRFYSKRVSPKVPSGSYK------IAQVSYELN--VLGTRGPRRMHCAMNSIPAS 272

  Fly  1294 SDDEGNQTNGSGE-------------------------ESNNAGNGKQYRD----LETFQKAQLR 1329
            |..||....|..:                         :.:|..:..::.|    |...|:..|.
plant   273 SLAEGGTVPGQPDIIVPRSILDESFRSITSSSSRKITYDYSNDFSSARFSDILGPLSEDQEVVLE 337

  Fly  1330 QKLKRGKIEPNGSASCANPAPVRREFVMHNKAPMWNEMSQVYQLDFGGRVTQESAKNFQI----- 1389
            :..:|            |..|:    |:.||.|.|:|..|.:.|:|.||||..|.||||:     
plant   338 EGKER------------NSPPL----VLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAANQ 386

  Fly  1390 -----------------------EFRGKQVMQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQR 1431
                                   :...|.::|||::..:.:|:||:||.||.||||:.|::...:
plant   387 PQPQPQPQPQPQPLTQPQPSGQTDGPDKIILQFGKVGKDMFTMDFRYPLSAFQAFAICLSSFDTK 451

  Fly  1432 L 1432
            |
plant   452 L 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 <81..221 CDD:441893
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <1249..1426 CDD:460094 58/253 (23%)
TLP1NP_177816.1 F-box_AtTLP-like 57..101 CDD:438924 12/72 (17%)
Tub 119..450 CDD:460094 80/380 (21%)
Blue background indicates that the domain is not in the aligned region.

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