DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and TLP6

DIOPT Version :10

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_175160.2 Gene:TLP6 / 841130 AraportID:AT1G47270 Length:413 Species:Arabidopsis thaliana


Alignment Length:394 Identity:95/394 - (24%)
Similarity:149/394 - (37%) Gaps:112/394 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1063 RNNMSPSSACKRCQPSASSVLDEITAVVPAVEPAKESPAVQAKPAPKKRFDVITSFTDSPL--FT 1125
            |:.::.:|.||..:.....|:.     ||.:......|....:|.|:          |:|:  |.
plant    95 RDVVACASVCKSWREMTKEVVK-----VPELSGLITFPISLRQPGPR----------DAPIQCFI 144

  Fly  1126 RK------HRFGIGRSKETAGTENSTPLLGRK---QDNGFSFVKQLSEVRWRRKEQPAQAQVNGS 1181
            ::      :|..:|.|...:| :.|..||..|   :..|..||..||...:.|          .|
plant   145 KRERATGIYRLYLGLSPALSG-DKSKLLLSAKRVRRATGAEFVVSLSGNDFSR----------SS 198

  Fly  1182 SNASTLERQPQPEITGAACGTVEATPVEAKASVSLHTQALTTLENIISRLRDLDEGRLTPPSTPQ 1246
            ||               ..|.:.:..:..|         .|..||             .||...:
plant   199 SN---------------YIGKLRSNFLGTK---------FTVYEN-------------QPPPFNR 226

  Fly  1247 RLPRSSPASPAASKKNKRQQSNSPIRHILNSPLLNRRQRKKQSIIESSDDEGNQTNG---SGEES 1308
            :||.|...||..|..:......| |.:.|| .|..|..|:.|.|:.|......|..|   |..|.
plant   227 KLPPSMQVSPWVSSSSSSYNIAS-ILYELN-VLRTRGPRRMQCIMHSIPISAIQEGGKIQSPTEF 289

  Fly  1309 NNAGNGKQYRDLETFQKAQLRQKLKRGKIEPNGSASCANPAPVRREFVMHNKAPMWNEMSQVYQL 1373
            .|.|                  |.|:..:....|.:....:.::...::.||:|.|:|..|.:.|
plant   290 TNQG------------------KKKKKPLMDFCSGNLGGESVIKEPLILKNKSPRWHEQLQCWCL 336

  Fly  1374 DFGGRVTQESAKNFQI---------------EFRGKQVMQFGRIDGNAYTLDFQYPFSALQAFAV 1423
            :|.||||..|.||||:               |.:.:.::|||:|..:.:|:|::||.||.||||:
plant   337 NFKGRVTVASVKNFQLVAAAAEAGKNMNIPEEEQDRVILQFGKIGKDIFTMDYRYPISAFQAFAI 401

  Fly  1424 ALAN 1427
            .|::
plant   402 CLSS 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 <81..221 CDD:441893
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <1249..1426 CDD:460094 56/194 (29%)
TLP6NP_175160.2 F-box_AtTLP-like 69..113 CDD:438924 4/17 (24%)
Tub 131..408 CDD:460094 87/353 (25%)
Blue background indicates that the domain is not in the aligned region.

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