DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tusp and TLP5

DIOPT Version :10

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_564485.1 Gene:TLP5 / 840948 AraportID:AT1G43640 Length:429 Species:Arabidopsis thaliana


Alignment Length:489 Identity:95/489 - (19%)
Similarity:169/489 - (34%) Gaps:162/489 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1011 QTGKSKSLDSC--DLLSLQ----TKLSSKEHEQVVRKLQEISDSS--------ACSSAANTLCFK 1061
            |..||..:::.  ||:.::    ..|.:.....|::||.| |:|:        ||:....|....
plant    33 QRSKSHGVEAHIEDLIVIKNTRWANLPAALLRDVMKKLDE-SESTWPARKQVVACAGVCKTWRLM 96

  Fly  1062 CRNNM-SPSSACKRCQPSASSVLDEITAVVPAVEPAKESPAVQA---KPAPKKRFDVITSFTDSP 1122
            |::.: ||..:.|            :|..|...:|......:|.   :......:.:..|.:.:.
plant    97 CKDIVKSPEFSGK------------LTFPVSLKQPGPRDGIIQCYIKRDKSNMTYHLYLSLSPAI 149

  Fly  1123 LF-TRKHRFGIGRSKETAGTE------------NSTPLLGRKQDN--GFSFVKQLSEVRWRRKEQ 1172
            |. :.|......||:....||            :|:..:|:.:.|  |..|:..        ...
plant   150 LVESGKFLLSAKRSRRATYTEYVISMDADNISRSSSTYIGKLKSNFLGTKFIVY--------DTA 206

  Fly  1173 PA--QAQVNGSSNASTL--ERQPQPEITGAACGTVEATPVEAKASVSLHTQALTTLENIISRLRD 1233
            ||  .:|:....|.|..  .::..|::...:....:.| .|.....:...:.:..:.:.|..|. 
plant   207 PAYNSSQILSPPNRSRSFNSKKVSPKVPSGSYNIAQVT-YELNLLGTRGPRRMNCIMHSIPSLA- 269

  Fly  1234 LDEGRLTPPSTPQRLPRSSPASPAASKKNKRQQSNSPIRHILNSPLLNRRQRKKQSIIESSDDEG 1298
            |:.|. |.||.|:.|.||.                                           ||.
plant   270 LEPGG-TVPSQPEFLQRSL-------------------------------------------DES 290

  Fly  1299 NQTNGSGEESNNAGNGKQYRDLETFQKAQLRQKLKRGKIEPNGSASCANPAPVRREFVMHNKAPM 1363
            .::.||.:..|::|:             ..|.|.:.||:.|               .|:..|.|.
plant   291 FRSIGSSKIVNHSGD-------------FTRPKEEEGKVRP---------------LVLKTKPPR 327

  Fly  1364 WNEMSQVYQLDFGGRVTQESAKNFQI------------------------------EFRGKQVMQ 1398
            |.:..:.:.|:|.||||..|.||||:                              ....|.::.
plant   328 WLQPLRCWCLNFKGRVTVASVKNFQLMSAATVQPGSGSDGGALATRPSLSPQQPEQSNHDKIILH 392

  Fly  1399 FGRIDGNAYTLDFQYPFSALQAFAVALANVTQRL 1432
            ||::..:.:|:|::||.||.||||::|:....:|
plant   393 FGKVGKDMFTMDYRYPLSAFQAFAISLSTFDTKL 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 <81..221 CDD:441893
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <1249..1426 CDD:460094 41/206 (20%)
TLP5NP_564485.1 F-box_AtTLP-like 55..99 CDD:438924 11/44 (25%)
Tub 117..424 CDD:460094 73/388 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.