DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and TLP2

DIOPT Version :10

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_849975.1 Gene:TLP2 / 816344 AraportID:AT2G18280 Length:394 Species:Arabidopsis thaliana


Alignment Length:485 Identity:102/485 - (21%)
Similarity:181/485 - (37%) Gaps:149/485 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   987 ILVDKKRNR------RKRQQQEDARRHKLQQTGKSKSLDSCDLLSLQTKLSSKEHEQVVRKLQEI 1045
            ||.|.|..|      .||...:.:.....|.|....::......||..:|.   |: ::.:::| 
plant     6 ILRDLKEVRDGLGGISKRSWSKSSHIAPDQTTPPLDNIPQSPWASLPPELL---HD-IIWRVEE- 65

  Fly  1046 SDSSACSSAANTLCFKCRNNMSPSSACKRCQPSASSVLDEITAVVPAVEPAKESPAVQAKPAPKK 1110
            |:::..:.||...|         :|.||    |...:..||.. :|........|....:|.|: 
plant    66 SETAWPARAAVVSC---------ASVCK----SWRGITMEIVR-IPEQCGKLTFPISLKQPGPR- 115

  Fly  1111 RFDVITSFTDSPL--FTRKHR--------FGIGRSKETAGTENSTPLLGRKQDNGFS---FVKQL 1162
                     |||:  |.:::|        :|:..|:    |||...||..::....:   |:..|
plant   116 ---------DSPIQCFIKRNRATATYILYYGLMPSE----TENDKLLLAARRIRRATCTDFIISL 167

  Fly  1163 SEVRWRRKEQPAQAQV------------NGSSNASTLERQPQPEITGAACGTVEATPVEAKASVS 1215
            |...:.|.......::            :..:.:||.:.||...:     ...:|.|   |...:
plant   168 SAKNFSRSSSTYVGKLRSGFLGTKFTIYDNQTASSTAQAQPNRRL-----HPKQAAP---KLPTN 224

  Fly  1216 LHTQALTTLENIISRLRDLDEGRLTPPSTPQRLPRSSPASPAASKKNKRQQSNSPIRHILNSPLL 1280
            ..|....|.|..:.|.|.           |:|:..:..:.|.:|              ::..|  
plant   225 SSTVGNITYELNVLRTRG-----------PRRMHCAMDSIPLSS--------------VIAEP-- 262

  Fly  1281 NRRQRKKQSIIESSDDE-GNQTNGSGEESNNAGNGKQYRDLETFQKAQLRQKLKRGKIEPNGSAS 1344
                    |:::..::| .:..:..||                        .:...|..|:.|.|
plant   263 --------SVVQGIEEEVSSSPSPKGE------------------------TITTDKEIPDNSPS 295

  Fly  1345 CANPAPVRREFVMHNKAPMWNEMSQVYQLDFGGRVTQESAKNFQI------------EFRGKQVM 1397
            ..:     :..|:.||:|.|:|..|.:.|:|.||||..|.||||:            |...:.::
plant   296 LRD-----QPLVLKNKSPRWHEQLQCWCLNFKGRVTVASVKNFQLVAEIDASLDAPPEEHERVIL 355

  Fly  1398 QFGRIDGNAYTLDFQYPFSALQAFAVALAN 1427
            |||:|..:.:|:|::||.||.||||:.:::
plant   356 QFGKIGKDIFTMDYRYPLSAFQAFAICISS 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 <81..221 CDD:441893
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <1249..1426 CDD:460094 44/189 (23%)
TLP2NP_849975.1 F-box_AtTLP-like 48..92 CDD:438924 13/61 (21%)
Tub 110..388 CDD:460094 76/362 (21%)
Blue background indicates that the domain is not in the aligned region.

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