DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and Tulp3

DIOPT Version :10

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_001387850.1 Gene:Tulp3 / 688749 RGDID:1585259 Length:463 Species:Rattus norvegicus


Alignment Length:560 Identity:130/560 - (23%)
Similarity:203/560 - (36%) Gaps:189/560 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   957 CSVGYLDSVAITPSDEALSALRKDAPNKRLILVDKKRNRRKR------QQQEDARRHKLQQTGKS 1015
            |:.|.....|.  .||.|...:....|:|.:|  :|:.|:||      |...:||..:|:..|  
  Rat     6 CAPGSRGDSAF--EDETLRLRQLKLDNQRALL--EKKQRKKRLEPLMVQPNPEARLRRLKPRG-- 64

  Fly  1016 KSLDSCDLLSLQTKLSSKEHEQVVRKLQEISDSSACSSAANTLCFKCRNNMSPSSACKRCQPSAS 1080
                            |:||..:|                           .|.:.|      :.
  Rat    65 ----------------SEEHTPLV---------------------------DPQTPC------SD 80

  Fly  1081 SVLDEITA----VVPAVEPAKESP---AVQAKPAPKKRFDVITSFTDSPLFTRKHRFGIGRSKET 1138
            .:|..|..    :.|..:..:..|   :|.:.|.|::..:. ::..:||:             ||
  Rat    81 VILHGIDGPAAFLKPEAQDLESKPQVLSVGSSPTPEEGTEG-SADGESPV-------------ET 131

  Fly  1139 AGTENSTPLLGRKQDNGFSFVKQLSEVRWRRKEQPAQAQVNGSSNASTLERQPQPEITGAACGTV 1203
            |...:...:|   |.:|.     ||.|.:  .|:|.:...:...|.|:|..|.:.|..||:    
  Rat   132 ASKPDLQEIL---QKHGI-----LSSVNY--DEEPDEEAEDEGENLSSLPAQSEKESAGAS---- 182

  Fly  1204 EATPVEAKASVSLHTQALTTLEN--IISRLRDLDEGRLTPPSTPQRLPRSSPASPAASKKNK--- 1263
                  .||:.......:|..:.  .:..:.:|::...:|      .||........::..|   
  Rat   183 ------QKAASDTGASGMTAQQGDAQLGEVENLEDFAYSP------APRGVTVKCRVTRDKKGMD 235

  Fly  1264 -----------RQQSNSPIRHILNSPLLNRRQRKK---QSIIESSDD-----EGNQTNGSGEESN 1309
                       .::.|..|.      ||..|:|||   .:.:.|:|.     ||....|. ..||
  Rat   236 RGLFPTYYMHLEKEENRKIF------LLAGRKRKKSKTSNYLVSTDPTDLSREGESYIGK-LRSN 293

  Fly  1310 NAG----------NGKQYRDLETFQKAQLRQKL----------------KRGKIEPNGSASCAN- 1347
            ..|          |..:.:.|  .:||..||:|                |...|.|..:.:... 
  Rat   294 LMGTKFTVYDHGVNPVKAQGL--VEKAHTRQELAAICYETNVLGFKGPRKMSVIIPGMNMNHERI 356

  Fly  1348 PAPVRRE----------------FVMHNKAPMWNEMSQVYQLDFGGRVTQESAKNFQIEFRGKQ- 1395
            |...|.|                ..:|||||:||:.:|.|.|:|.|||||.|.||||| ..|.. 
  Rat   357 PFRPRNEHESLLSKWQNKSMENLIELHNKAPVWNDDTQSYVLNFHGRVTQASVKNFQI-VHGNDP 420

  Fly  1396 ---VMQFGRIDGNAYTLDFQYPFSALQAFAVALANVTQRL 1432
               ||||||:..:.:|||:.||..||||||:.|::...:|
  Rat   421 DYIVMQFGRVADDVFTLDYNYPLCALQAFAIGLSSFDSKL 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 <81..221 CDD:441893
WD40 repeat 91..126 CDD:293791
WD40 repeat 132..168 CDD:293791
WD40 repeat 173..208 CDD:293791
WD40 repeat 216..263 CDD:293791
WD40 repeat 270..333 CDD:293791
Tub <1249..1426 CDD:460094 72/245 (29%)
Tulp3NP_001387850.1 Tub_N 30..193 CDD:465092 47/249 (19%)
Tub 214..458 CDD:460094 74/259 (29%)
Blue background indicates that the domain is not in the aligned region.

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