DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tusp and Oseg4

DIOPT Version :10

Sequence 1:NP_001263014.1 Gene:Tusp / 43317 FlyBaseID:FBgn0039530 Length:1433 Species:Drosophila melanogaster
Sequence 2:NP_647653.1 Gene:Oseg4 / 38219 FlyBaseID:FBgn0035264 Length:1205 Species:Drosophila melanogaster


Alignment Length:608 Identity:141/608 - (23%)
Similarity:236/608 - (38%) Gaps:177/608 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHLHFERNI----NTKCDCTILSLSWMGKVPDDIPEDEGWKLNRTNYYQEGWLATGNVRGIVGVT 61
            |.::..:.|    |.|.:|    ::|                |:    :||::|.....|::.| 
  Fly     1 MFVYLSKKIAIPNNVKLNC----IAW----------------NK----EEGYIAVAGTDGLLKV- 40

  Fly    62 FTTSHCRKNMDYP-------------LRTNYNLRGHRSDVILVKWNEPYQKLASCDSSGIIFVWI 113
                 .:.:...|             |..|..|.||:..|.:|.||:..|||.|.|:.|:|.||:
  Fly    41 -----LKLDQATPNGQSKGGLAAVSNLSMNQTLDGHKESVRVVTWNDAQQKLTSSDTDGVIMVWM 100

  Fly   114 KYEGRWSIELINDR-NTPVTHFSWSHDGRMALICYQDGFVLVGSVAGQRYWSSMLNLESTITCGI 177
            .|:|.|..|:.||| .:.|...||:.||....|.|:||.::||||.|.|.:..  .|:.|...|:
  Fly   101 LYKGSWYEEMTNDRKKSTVASMSWTSDGSRICIVYEDGAIIVGSVDGNRIFGK--ELKGTHLTGV 163

  Fly   178 -WTPDDQQVYFGTTQGQVIVMDVHG--AMVSQVQL--------SNDVPITSMAWSCEKFKMEEGE 231
             |:||::.:.|....|:..:.|..|  ||...:|.        |....|.|:.|...:       
  Fly   164 QWSPDNRLILFALANGECHLYDNQGNFAMKLHIQCVNISGGSSSRGHRIASICWFSGR------- 221

  Fly   232 EAEPGVTNAAKRSFVLAVSFQNGYIYLLKSFDDVSPAHINTCLNGALGMVMEWSNSRELLAVAGT 296
                 |..:.||. |||:.::||.:.::::.:|.:||..:|   |...:..:|::...:||:.||
  Fly   222 -----VVQSRKRP-VLAICYENGRVQIMRNENDDAPAIFDT---GMRNVDAKWNHDGTVLAICGT 277

  Fly   297 LRTGVDGTKTEDMGTPSCYTNLVKFYTETGTCLYQAHIPCSSATVSAITWGHNDKRLFIATGTQV 361
            ....|..|...|       ||.|.||:..|.......:|  ...:::::|.....|:.:|..:.:
  Fly   278 TLDAVSPTSQRD-------TNQVCFYSPLGKIYRTLKVP--GTDITSLSWEGKSLRIAMAVDSFI 333

  Fly   362 HIAWVSRRVASLQLLCRLE---IQASVGS---ESLLPLLPLPSRIKSLIGNLFAQTIRCCVPDLK 420
            :.|    .:....:.|..|   :..:.||   ||.:.::            .|..|:        
  Fly   334 YFA----NIRPDYIWCYFEKTVVFLNSGSATRESPMSVI------------TFWNTV-------- 374

  Fly   421 SLRDFVS--RPPLC--STRLHCTM--------IRH------DDDSNLSSGTCYTLYL-EYLGGLV 466
            |.:.|:.  .|.||  |:..||.:        |:.      ::.||.:....|.|.| ..:|..|
  Fly   375 SNQSFLKEVEPTLCLASSSEHCVLGVECVSSNIKEIALSTLENRSNPADDRVYQLLLCNSIGTTV 439

  Fly   467 PLLKGKRTSKIRPEFVIFDP------------------------------------QVNDSPLYF 495
                ..:.:.|||.||..:.                                    .::|:|...
  Fly   440 ----DSKYTDIRPCFVGINSSYVAIASQEEILIWHYHTPKSASTLHNVKARKEKRFHIDDTPTGV 500

  Fly   496 QYSAE--AKSSSGSSQSTTTGNS 516
            :.:.:  ..||||...||..|.|
  Fly   501 EMAKDLMLSSSSGDGHSTQRGIS 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TuspNP_001263014.1 WD40 <81..221 CDD:441893 54/151 (36%)
WD40 repeat 91..126 CDD:293791 16/34 (47%)
WD40 repeat 132..168 CDD:293791 14/35 (40%)
WD40 repeat 173..208 CDD:293791 10/37 (27%)
WD40 repeat 216..263 CDD:293791 10/46 (22%)
WD40 repeat 270..333 CDD:293791 16/62 (26%)
Tub <1249..1426 CDD:460094
Oseg4NP_647653.1 WD40 <18..318 CDD:441893 94/356 (26%)
WD40 repeat 19..70 CDD:293791 12/80 (15%)
WD40 repeat 76..115 CDD:293791 18/38 (47%)
WD40 repeat 119..152 CDD:293791 15/32 (47%)
WD40 repeat 161..202 CDD:293791 11/40 (28%)
WD40 repeat 212..280 CDD:293791 21/83 (25%)
WD40 repeat 290..333 CDD:293791 10/44 (23%)
COG3899 <710..1118 CDD:443106
Blue background indicates that the domain is not in the aligned region.

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