DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side and side-V

DIOPT Version :10

Sequence 1:NP_001247334.1 Gene:side / 43300 FlyBaseID:FBgn0016061 Length:986 Species:Drosophila melanogaster
Sequence 2:NP_611765.2 Gene:side-V / 37679 FlyBaseID:FBgn0085400 Length:1174 Species:Drosophila melanogaster


Alignment Length:1100 Identity:256/1100 - (23%)
Similarity:397/1100 - (36%) Gaps:339/1100 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 VGFTLVLLTCLQQLKS----VSADEESQDFQKNIPARLVWAALGKTVELPCDLTPPTS-QDSVKL 125
            |.|.|||.|.|..::.    .:|||.        |...:..|:|..|.|||||.|.|. .|.|:|
  Fly    14 VAFVLVLATALSLVQGEQHPATADEG--------PLSEILTAVGSEVALPCDLVPGTGIVDKVQL 70

  Fly   126 LLWFKDTTGIPLYSLDSRGGNVKLAPHAAIASDLGQRLFFSIGDNPKDSRLQINDVKPEDGGVYR 190
            ::|::.....|:|:.|:||..:.|....|..|...::..|....:|  ..|:|.:::..|.|:|:
  Fly    71 VIWYRQGNVKPIYTFDARGRPLNLGIPWADESVFNKKAHFHHDTDP--PALRIKNIQTSDAGLYK 133

  Fly   191 CRVDFFNSPTRNFRHNLTLVVPPEEPRIFDAQGKEI-SQMAGPFREGYELFLCCQVRGGRPPPKV 254
            |||||..|||||:|.|:|::|||....|.|..|.|| .|.|||:.||..:.|.|...||.|||:|
  Fly   134 CRVDFHKSPTRNWRINVTVLVPPTALTILDHHGAEIRDQTAGPYLEGDSIDLTCLSSGGVPPPRV 198

  Fly   255 TWWRDDTELIGTSHTSVEEGATVMVNQLLIGTTTRDFYGIRIECRAQGTRLVDPVRKDVTVQVYL 319
            :|||:.. ||..|...:.:|:  :.|.|.:....|........|:|....:|..:.|.|.:.:.|
  Fly   199 SWWREHA-LIDDSFQVLPDGS--VRNVLRLKNIQRKDLLTMYTCQASNGHVVPALTKKVILDMNL 260

  Fly   320 KPVRVKIATPNELLTAGQPMPIRCESWGSYPAAKITWLLDGEPIRNAEVTVHSDKEDGNITTSIL 384
            .|:.:.:...|..:.||....:.|.:.|:.|..:|.|...|:.:|.|   ..|...|||.|.|.|
  Fly   261 PPLSLLLQGLNHAVIAGTRSHVTCTAIGARPPPEIIWSKAGQIVRGA---TSSTSSDGNTTISEL 322

  Fly   385 TLKVTSENDNAELTCRAT---------------------NPWFSGGAIEDKRIIRVAYPPTVSVH 428
            .|....|::..::.|..:                     ....:|..::|.|::.|.:.|.|:::
  Fly   323 MLIPVPEDNERQVVCSISLNAGITSQQLHEGHTTVMTTLGNGHTGLYLKDSRVLNVTHAPIVNLN 387

  Fly   429 L-ANEDPSRLVTRAEGQNVTFKCRADARPPVTSYSWFKNGMRMSGE-----STEIMHLTQLERES 487
            | |..||..|:   :|.:|..:|...|.|.:|...|:.:..::...     |.:.:.|..:.:.|
  Fly   388 LGAPLDPDNLL---KGTDVYLECDVKANPAITRVEWYHSDKQLHSSRGIIISNQTLVLQGISKSS 449

  Fly   488 AGAYACGATNTEGETRSSSLTLKVQFSPRCKSGTEQTSIGAVSLHSILVKCEVDADPPDSVRFSW 552
            .|.|.|.|:|.:|...|:.:.|.|::.|.|||  |.|.|.|....:|.:.|||||:|.|::.:.|
  Fly   450 HGQYFCRASNLQGSVSSNEVYLDVKYPPVCKS--ESTIIRAALKQTINITCEVDANPVDNLNYKW 512

  Fly   553 TYNNT------------------------------------------------------------ 557
            .:||:                                                            
  Fly   513 HFNNSLESLIELPQLGQGAPVMLASGSDQSGYYQRSKRKHSHGMQQRLLHGRHGRMAAVRFEDED 577

  Fly   558 ----------------------------------------RNVSP-------------------- 562
                                                    :.:||                    
  Fly   578 EDGYGEFEEYGDEVGQPFTQMVYSNMVHKNHVESSKQQQRKQLSPQQQQQQQQMASGGSSGDSHT 642

  Fly   563 -------------VLNSRIQSNGLAS--TVTYLP----------QTDSELITLACWASNAVGRQT 602
                         .|:.:....|:|:  |.|..|          ::......::|.||:.:| .:
  Fly   643 PSGGVILERKRLVALHKQHHRGGVATPPTTTAAPPLNNVYSYHVESYESFGAISCVASSPMG-HS 706

  Fly   603 TPCLVHILPANTPEAPKACELRNDTV--LEVVCVAGSDGGLSQYFMLEVVGGDPLYSGDPGGSAG 665
            .||..||.||:.||..|.|...|.|.  |::.|:.|.|||:.|:|..::.               
  Fly   707 APCWYHIQPADLPEPVKNCTAYNATANSLQIQCIPGYDGGIPQHFHAQIY--------------- 756

  Fly   666 QGRGQFSEAIGLGDNEISTLNDQATSAPIFRMQENSPQFRLNNLEPGREYQFLVYAVNAKGRSEP 730
                                 |:.....::.......:|.:..|.....:...:.||||:|.|  
  Fly   757 ---------------------DELNRQILYNASYKYSEFTVKRLPSDSVFVIRITAVNAQGAS-- 798

  Fly   731 PVVIENVRVAAQLGPYDESILSEDPTPAETTHHGGGGVGGSGSSSGLGTGASTGSGPEKQSTLLI 795
                   :||.:|.                        |.:.|:..|.|.:||  ....|.|.|:
  Fly   799 -------KVAYRLR------------------------GRTLSAPLLRTASST--AVLVQLTPLL 830

  Fly   796 LAAVVVIGAVVVTSIIVAGIVVVCRHRPRPPEPQEVRKSMRPARNDVPSMYIEEDELNELEEGGG 860
            .|.|.||..:::.:|.|   |:|.:.|           |.|..|..                  |
  Fly   831 GALVGVIATLILVAICV---VIVIKFR-----------SKRGGRRH------------------G 863

  Fly   861 RAADIRARVAPPNSHLCGGGGMPMPGGVGSSGGAIVGVAGPHHYISESFIQYAQPSLNGDVLLPL 925
            ..||.....|..      |...|:...:||           |..:.:.         |.|| :|.
  Fly   864 SGADATTTEADK------GSAEPLSRNMGS-----------HSSLEDK---------NPDV-VPQ 901

  Fly   926 LVTSSQPCSTNSTISSVVLAMPQAKLCPDPASRNTAWPPEYPDLILPR-----GELEFTT 980
            ...|.............:....|..|...|...|||.||  |..:.|.     |||..||
  Fly   902 EANSEDEFHQEEKAFDRLNMESQRILYTPPTRINTASPP--PPSLSPTFGKQYGELSLTT 959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sideNP_001247334.1 V-set 95..211 CDD:462230 43/116 (37%)
Ig 211..301 CDD:472250 33/90 (37%)
Ig strand B 239..243 CDD:409353 1/3 (33%)
Ig strand C 253..257 CDD:409353 1/3 (33%)
Ig strand E 281..285 CDD:409353 1/3 (33%)
Ig strand F 295..300 CDD:409353 1/4 (25%)
Ig 326..408 CDD:472250 21/102 (21%)
Ig strand B 339..343 CDD:409353 0/3 (0%)
Ig strand C 353..357 CDD:409353 1/3 (33%)
Ig strand E 384..388 CDD:409353 2/3 (67%)
Ig strand F 396..401 CDD:409353 1/4 (25%)
Ig_2 442..511 CDD:464026 18/73 (25%)
FN3 <700..735 CDD:238020 8/34 (24%)
side-VNP_611765.2 V-set 42..153 CDD:462230 42/112 (38%)
Ig_3 178..243 CDD:464046 22/67 (33%)
Ig 274..359 CDD:472250 20/87 (23%)
Ig strand B 280..284 CDD:409353 0/3 (0%)
Ig strand C 294..298 CDD:409353 1/3 (33%)
Ig strand E 320..324 CDD:409353 2/3 (67%)
Ig strand F 334..345 CDD:409353 1/10 (10%)
Ig strand G 355..358 CDD:409353 0/2 (0%)
Ig 400..466 CDD:472250 16/65 (25%)
Ig strand B 403..407 CDD:409353 1/3 (33%)
Ig strand C 416..421 CDD:409353 1/4 (25%)
Ig strand E 438..442 CDD:409353 0/3 (0%)
Ig strand F 452..457 CDD:409353 2/4 (50%)
Ig strand G 465..468 CDD:409353 1/2 (50%)
FN3 719..798 CDD:214495 22/114 (19%)

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