DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42534 and AT4G03490

DIOPT Version :10

Sequence 1:NP_651560.2 Gene:CG42534 / 43298 FlyBaseID:FBgn0260487 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_001328102.1 Gene:AT4G03490 / 827426 AraportID:AT4G03490 Length:710 Species:Arabidopsis thaliana


Alignment Length:369 Identity:91/369 - (24%)
Similarity:143/369 - (38%) Gaps:96/369 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 LLRQRDRSHRNALHYCAA------------------QDSE---GSKDLVAAASIAIAAPELLESA 192
            ||.:|:.....|||..||                  ||..   ||:.:|..        .:...:
plant    84 LLVRRNYKGDLALHVAAAAGHKLIVGLLIDCLRQLPQDITMVIGSEQMVIG--------NIFRVS 140

  Fly   193 DEDGFTPLHLAVIQGNLAMVNLLLA--NKADVNAVDNEGHSVVHWATVCGEVESLRAVLA----- 250
            :.||.|.|||: ::||...|:|.|.  :::....:|.|..|.::.|...|.|..:..:|.     
plant   141 NNDGNTALHLS-LKGNHVSVSLQLVREDRSTCFLLDKEDVSPLYMAAEAGYVSLVEHMLRGLDAS 204

  Fly   251 -AGASVAKPDANGGTPLHYAAQMCGASKQDSKQQASSSNSSRLSLEILGILLSHPQSSVDVQDKD 314
             .|.||                :|.|.|..             :|:||..:|......|:.:|:|
plant   205 FVGKSV----------------LCAAVKSQ-------------NLDILTAVLESDSDLVESRDED 240

  Fly   315 GRQPLLWAASAG------------SAKAVIALVKAGARVESSDKDGLTALHCAGSRGHTECIDTL 367
            ||.||..|||.|            ::...:|.:|        ::||...:|.|.|...|..:..:
plant   241 GRTPLATAASIGYDIGVQHMLTRFASSTQVAYIK--------NEDGSFPIHSACSARCTSALKVI 297

  Fly   368 IGLCGAPTDLIDSNGCTALHYAVTLGHADATARLL---DLEADPNRQDRKGRTPAHCGCSKGQFE 429
            :.......::::|.|...||.|...|:|.|...||   |::...|.||.:|.||.|...|....:
plant   298 LKHHPDTIEMLNSQGQNVLHVAAKSGNARAVGYLLRKSDVKRLINEQDIEGNTPLHLASSNSHPK 362

  Fly   430 TLKL-LKERGANLWLRNAKGDLPL-----HEAAASGRRELLEWL 467
            .:.| :.:|..:|.:.|.||...|     |.|.....:|.|.|:
plant   363 VVSLFIHDRRVDLKILNYKGFTALDAAEDHMATIPSLQEWLIWM 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42534NP_651560.2 Ank_2 127..226 CDD:463710 24/99 (24%)
ANK repeat 195..226 CDD:293786 11/32 (34%)
ANKYR 209..514 CDD:440430 70/288 (24%)
ANK repeat 228..259 CDD:293786 9/36 (25%)
ANK repeat 314..345 CDD:293786 11/42 (26%)
ANK repeat 347..379 CDD:293786 6/31 (19%)
ANK repeat 381..412 CDD:293786 11/33 (33%)
ANK repeat 414..479 CDD:293786 17/60 (28%)
ANK repeat 419..445 CDD:293786 5/26 (19%)
ANK repeat 481..511 CDD:293786
Ank_2 486..572 CDD:463710
ANK repeat 516..542 CDD:293786
AT4G03490NP_001328102.1 ANKYR 24..265 CDD:440430 52/218 (24%)
ANK repeat 36..89 CDD:293786 2/4 (50%)
ANK repeat 91..141 CDD:293786 10/57 (18%)
ANK repeat 177..206 CDD:293786 6/28 (21%)
ANK repeat 207..231 CDD:293786 10/52 (19%)
ANKYR 211..>392 CDD:440430 52/201 (26%)
ANK repeat 240..275 CDD:293786 11/42 (26%)
ANK repeat 277..309 CDD:293786 6/31 (19%)
ANK repeat 311..345 CDD:293786 11/33 (33%)
PGG 437..547 CDD:433609
Blue background indicates that the domain is not in the aligned region.

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