DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42534 and trp-4

DIOPT Version :10

Sequence 1:NP_651560.2 Gene:CG42534 / 43298 FlyBaseID:FBgn0260487 Length:1555 Species:Drosophila melanogaster
Sequence 2:NP_493429.2 Gene:trp-4 / 190574 WormBaseID:WBGene00006616 Length:1924 Species:Caenorhabditis elegans


Alignment Length:653 Identity:155/653 - (23%)
Similarity:265/653 - (40%) Gaps:100/653 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LKAAKKQLQFESP---LPRRTRTMQQQQQQD------NDHPPQQEKQEQQQQQQQRQEAADK--- 73
            |:.|.|...||:.   |...:..:.|:|.::      ||.........:.:|:|......|.   
 Worm   766 LQVAAKSCNFEAASMILKHLSEVLTQEQLKEHVNHRTNDGFTALHYAAEIEQRQLHFPGEDAKLV 830

  Fly    74 --------VIAMPGSSQDTDAAAEAAVDVPETDPDPAQLTVSQSQ----SSSTVARRRLAEGCTS 126
                    ::.||..:     |.|.|:.:.....:.|.|....::    :...|..::...|.:.
 Worm   831 NLLIDYGGMVEMPSLN-----ANETAMHMAARSGNQAVLLAMVNKIGAGAVQIVQNKQSKNGWSP 890

  Fly   127 LMYACQRG--DIVQVLAQMREKPELLRQRDRSHRNALHYCAAQDSEGSKDLVAAASIAIAAPELL 189
            |:.||.||  .:..:|.:...:.::.   |...|.|||..|   ..|...||   .:.:.....:
 Worm   891 LLEACARGHSGVANILLKHHARIDVF---DEMGRTALHLAA---FNGHLSLV---HLLLQHKAFV 946

  Fly   190 ESADEDGFTPLHLAVIQGNLAMVNLLLANK-ADVNAVDNEGHSVVHWATVCGEVESLRAVLAAGA 253
            .|..:.|..|||||...|::.:||:|:.:. |.:.|:..:..:.:|:|...|::...:.:||.||
 Worm   947 NSKSKTGEAPLHLAAQHGHVKVVNVLVQDHGAALEAITLDNQTALHFAAKFGQLAVSQTLLALGA 1011

  Fly   254 SVAKPDANGGTPLHYAAQMCGASKQDSKQQASSSNSSRL------------------SLEILGIL 300
            :....|..|.||||.||:...........:..::|.|.|                  ||.::..|
 Worm  1012 NPNARDDKGQTPLHLAAENDFPDVVKLFLKMRNNNRSVLTAIDHNGFTCAHIAAMKGSLAVVREL 1076

  Fly   301 LSHPQSSVDVQDKD---GRQPLLWAASAGSAKAVIALVKAGARVESSDKDGLTALHCAGSRGH-- 360
            :...:..| :|.|.   ....|..||:.|.|..|..|::.||..|..:..|:||||.....|.  
 Worm  1077 MMIDKPMV-IQAKTKTLEATTLHMAAAGGHANIVKILLENGANAEDENSHGMTALHLGAKNGFIS 1140

  Fly   361 -TECIDTLI-GLCGAPTDLIDSNGCTALHYAVTLGHADATARLL-----DLEADP---NRQDRK- 414
             .|..|.:: ..|...|      |..|||.|...|::|....:|     .:.::|   |....| 
 Worm  1141 ILEAFDKILWKRCSRKT------GLNALHIAAFYGNSDFVNEMLKHVQATVRSEPPIYNHHVNKE 1199

  Fly   415 -----GRTPAHCGCSKGQFETLKLLKERGANLWLRNAKGD-LPLHEAAASGRRELLEWLLAQRPK 473
                 |.||.|.....|....:::|..:|..:...:...: :|||.||..|...::..||::..:
 Worm  1200 FSTEYGFTPLHLAAQSGHDSLVRMLLNQGVQVDATSTTMNVIPLHLAAQQGHIAVVGMLLSRSTQ 1264

  Fly   474 QVNTTSNDGRSLLHIAAANDYTDMCKLLLDYGADVNAVYRNSRGLVLTPLDGALQRGHRSTAKFL 538
            |.:.....||:.||:||.|.:.:|..||:..|:::|.:.:|.    .|.|..|.:.||.|..|..
 Worm  1265 QQHAKDWRGRTPLHLAAQNGHYEMVSLLIAQGSNINVMDQNG----WTGLHFATRAGHLSVVKLF 1325

  Fly   539 QANGGQPANKVRLSSRRTGN-PFHETNATDMVRPLKYV--EKEELHDLRSSKKYVVYLKRSDSDN 600
            ..:...|     |:..:.|. |.....|.:.:..|:::  :|.:.|.|...:|::..|......|
 Worm  1326 IDSSADP-----LAETKEGKVPLCFAAAHNHIECLRFLLKQKHDTHQLMEDRKFIFDLMVCGKTN 1385

  Fly   601 GNE 603
            .||
 Worm  1386 DNE 1388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42534NP_651560.2 Ank_2 127..226 CDD:463710 28/101 (28%)
ANK repeat 195..226 CDD:293786 12/31 (39%)
ANKYR 209..514 CDD:440430 88/345 (26%)
ANK repeat 228..259 CDD:293786 7/30 (23%)
ANK repeat 314..345 CDD:293786 10/33 (30%)
ANK repeat 347..379 CDD:293786 10/35 (29%)
ANK repeat 381..412 CDD:293786 10/38 (26%)
ANK repeat 414..479 CDD:293786 17/71 (24%)
ANK repeat 419..445 CDD:293786 4/25 (16%)
ANK repeat 481..511 CDD:293786 12/29 (41%)
Ank_2 486..572 CDD:463710 23/86 (27%)
ANK repeat 516..542 CDD:293786 7/25 (28%)
trp-4NP_493429.2 ANKYR 312..581 CDD:440430
ANK repeat 352..383 CDD:293786
ANK repeat 385..418 CDD:293786
ANK repeat 424..454 CDD:293786
ANK repeat 456..489 CDD:293786
ANKYR 473..766 CDD:440430 155/653 (24%)
ANK repeat 491..523 CDD:293786
ANK repeat 526..556 CDD:293786
ANK repeat 558..590 CDD:293786
ANK repeat 592..623 CDD:293786
ANK repeat 625..656 CDD:293786
ANK repeat 658..688 CDD:293786
ANK repeat 692..726 CDD:293786
ANK repeat 728..753 CDD:293786
Ank_2 733..837 CDD:463710 13/70 (19%)
ANK repeat 761..802 CDD:293786 8/35 (23%)
ANK repeat 804..842 CDD:293786 4/37 (11%)
ANKYR 845..1130 CDD:440430 71/299 (24%)
ANK repeat 849..884 CDD:293786 5/34 (15%)
ANK repeat 886..917 CDD:293786 7/33 (21%)
ANK repeat 919..950 CDD:293786 9/36 (25%)
ANK repeat 952..982 CDD:293786 11/29 (38%)
ANK repeat 986..1017 CDD:293786 7/30 (23%)
ANK repeat 1092..1123 CDD:293786 10/30 (33%)
Ank_2 1097..1234 CDD:463710 38/142 (27%)
ANK repeat 1204..1236 CDD:293786 7/31 (23%)
TRPV 1209..1879 CDD:454755 47/189 (25%)
ANK repeat 1238..1270 CDD:293786 9/31 (29%)
ANK repeat 1272..1303 CDD:293786 12/30 (40%)
ANK repeat 1305..1336 CDD:293786 10/39 (26%)
ANK repeat 1338..1366 CDD:293786 5/27 (19%)
Blue background indicates that the domain is not in the aligned region.

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