DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and l3mbtl2

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_956326.1 Gene:l3mbtl2 / 568473 ZFINID:ZDB-GENE-030131-8713 Length:805 Species:Danio rerio


Alignment Length:725 Identity:161/725 - (22%)
Similarity:268/725 - (36%) Gaps:215/725 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   686 NEFNFLQINERCQPRQGPAAYFERPLYDRPGRRPSACVHPLLYLCQRCNFHGPAADFLA--PHFC 748
            |:.||....:     .||.             :||:.|...:..|:.|...|....|.:  ..||
Zfish   142 NQHNFSDDGD-----NGPV-------------KPSSWVDDGIVACEMCGAVGSIDTFFSRTKRFC 188

  Fly   749 SVGCVRRSQKRRLPQSTQKESKISRTQLEQTAGTAPDLPQKRQTN-YKPHKSLSAIQEQLQQRQK 812
            |..|     .|....:::|.|.::|.|...:..::..|..|.||. .:|        :.::|.|:
Zfish   189 SASC-----SRSYSSNSKKSSILARLQGRPSKKSSHKLCPKTQTEVLRP--------KVIEQHQE 240

  Fly   813 DKP------RKPFRWSEYLKSKGKDVAAPIHLFLNPFPISPNCFE-----IGMKLEAIDPENC-- 864
            .:|      ...|.|..||:..|. :|||:..|.:    .|.|.:     :|:|:|.::....  
Zfish   241 SRPFVQDATLAGFDWGSYLEKSGL-LAAPVSCFRH----VPLCAQWEDVYVGLKVEVLNTHTALP 300

  Fly   865 -SLFCVCSIVEVRGYRLKLSFDGY--SSMYDFWVNADSQDIFPPGWCDETARVLQAPKDYNSERF 926
             .::.:.::|::.||:..|.::|:  ...:|.|.|..:.|:.|.|||....:.|..|::.:.:  
Zfish   301 SKVYWIATVVQLAGYKALLRYEGFEDDDRHDLWCNLGTADVHPIGWCAVNNKPLVPPQEVHQQ-- 363

  Fly   927 SWSRYLVK--TGGKAAP---------------------------------------------RAL 944
            .|..||::  .|....|                                             |.|
Zfish   364 DWKSYLMERLVGAHTIPVDFHVKMADSLRCPFRQGVRVEVVDRSQVSRTRLAVVDTVIGGRLRLL 428

  Fly   945 F------------------------GHLNMQQQMD---------VRNG----------------- 959
            :                        .|:...:.:|         |..|                 
Zfish   429 YEDAGLGPSGEVLSDFWCHMQSPLVHHVGWSETVDHSIKETDTNVNMGSHPAFRRVHQNSVPDQF 493

  Fly   960 ------------FAVGMHLEAEDLNDTGKICVATVTDI-LDERIRVHFDG--------WDDCYDL 1003
                        |..||.:||.|..:.|.||||:|..: ||..|.|..||        | .||  
Zfish   494 KKLRTVYMGATFFKEGMKIEAIDPLNLGNICVASVRKVLLDGYIMVGIDGVEIGDGSDW-FCY-- 555

  Fly  1004 WVHITSPYIHPCGWHEGRQ-QLIVPPDYQKSAFIWDDYISEVGGMAASKELF-TPRQPMEYQERM 1066
              |.:|..|.|.|:.|... .|.|||.|.::.|.|..|:.|.|.:||.:.|| |......:...|
Zfish   556 --HASSHAILPVGYCENNDIPLTVPPGYDQATFTWPVYLEETGAVAAPQRLFNTDDVGHGFTSGM 618

  Fly  1067 KLEVVDQRNPCLIRPATVVTRKGYRVQLHLDCWPTEYYFWLEDDSPDLHPIGWCEATSHELETPP 1131
            |||.||...|.|:..|||....|..:.||.|.|..|:..|::..||:::|:||||.|.::|:.|.
Zfish   619 KLEAVDLMEPRLVCVATVRRCVGRLLLLHFDGWEPEFDQWVDCQSPEIYPVGWCEITGYQLQPPI 683

  Fly  1132 GYLQPKSVMPCDVEGCRGFGNAKRFNLNVHALRECCPYAPENWRQWRSKTVKPPRVAPENIRRGW 1196
            |...|:.                  ..:.||.::..|:..:..|::..|..|.......|.....
Zfish   684 GPEPPQG------------------QEHSHASKKAKPFKGKRKRRFLRKNAKINLKTQTNENTEM 730

  Fly  1197 AKKTKRACSEAKQA---IKEDSQQEIVYPKVAEVVQAKRKTSPCEEKVVKKQK--------QMQK 1250
            .:..:.|.:..|.:   ||.:.::|:    :|..|:.:...:|.......|:.        :.:|
Zfish   731 IQSQEAANTSDKPSTLQIKTEPEEEV----IAVRVKVEELETPILSSAQSKESHQGALTTFKREK 791

  Fly  1251 EEDAEQVPDE 1260
            ::|.::..||
Zfish   792 DDDEDEEEDE 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091 26/155 (17%)
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092 37/126 (29%)
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093 27/71 (38%)
SAM_PNT 1278..1367 CDD:460486
l3mbtl2NP_956326.1 THAP 5..89 CDD:461662
MBT_L3MBTL2_rpt1 281..380 CDD:439111 22/100 (22%)
MBT 382..471 CDD:459242 4/88 (5%)
MBT_L3MBTL2_rpt3 506..596 CDD:439117 36/94 (38%)
MBT_dSfmbt-like_rpt4 612..682 CDD:439090 27/69 (39%)
Blue background indicates that the domain is not in the aligned region.

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