DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and mbtd1

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:XP_005169539.3 Gene:mbtd1 / 568340 ZFINID:ZDB-GENE-060810-138 Length:705 Species:Danio rerio


Alignment Length:763 Identity:177/763 - (23%)
Similarity:280/763 - (36%) Gaps:235/763 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   617 MSPPPKLADPKPSSPPAKNAKKAND------------HDANPSPSSK-TNDFKKSMMQNLNMLKW 668
            |..|..:|:..|     ::.:|..|            .|::.|.||: :.|...|:..:|.::|.
Zfish     1 MENPRDMAEHTP-----RSERKRRDSFGMFDGYDSCSEDSSSSSSSEDSEDEVPSIPASLPIIKN 60

  Fly   669 RGQQPANLQNSTVRFELNEFNFLQINERCQPRQGPAAYFERPLYDRPGRRPSACVHPLLYLCQRC 733
            .||                                       :|..|..:..      :..|:.|
Zfish    61 NGQ---------------------------------------VYTYPDGKAG------MATCEMC 80

  Fly   734 NFHGPAADFLA--PHFCSVGCVRRSQKRRLPQSTQKESKISRTQLEQTAGTAPDLPQKRQTNYKP 796
            ...|....|.:  ..||||.|     .|....:::|.|.::|.|      ..|...:.:....:|
Zfish    81 GMVGVRDAFYSKTKRFCSVSC-----SRSYSSNSKKASILARLQ------GKPPTKKAKVLQKQP 134

  Fly   797 HKSLSAIQEQLQQRQKDK-------PRKPFRWSEYLKSKGKDVAAPIHLFLN-PFPISPNCFEIG 853
            ..:..|...|.|..|:::       |.:.|.|.:|:.|... |.||:..|.: |..:.......|
Zfish   135 LMAKLAAYAQYQASQQNQAKSKSVVPVEGFDWGQYICSNNL-VGAPVSCFKHVPMGMCWGDIAEG 198

  Fly   854 MKLEAIDPE---NCSLFCVCSIVEVRGYRLKLSFDGY--SSMYDFWVNADSQDIFPPGWCDETAR 913
            :::|..:.:   :..::.|..||::.|::..|.::|:  .|..|||.|....:|.|.|||..:.:
Zfish   199 LRVEVFNSDTNLSTKVYWVAEIVKLAGFKALLRYEGFDNDSSRDFWCNLCIPEIHPVGWCASSGK 263

  Fly   914 VLQAPKDYNSERFSWSRYLVK--TGGKAAP----------------------------------- 941
            .|..||....:..:|..:|||  ||.|..|                                   
Zfish   264 PLVPPKSIQHKYSNWKAFLVKRLTGAKTLPPEFATKVQENMQYPFKKLMRVEVVDKTHLCRTRVA 328

  Fly   942 ---RALFGHLNM-------------------------------------------QQQMDV---- 956
               :.:.|.|.:                                           :.|||.    
Zfish   329 LVEQVIGGRLRLVYEESQDGTDDFWCHMLSPLIHSIGWSRSIGHRFKRSEVSKKIEGQMDAPSQL 393

  Fly   957 --------RNG--FAVGMHLEAEDLNDTGKICVATVTDIL-DERIRVHFDG--------WDDCYD 1002
                    :||  |..||.|||.|..:...||||||..:| |..:.:..||        | .|| 
Zfish   394 FLKIKDVDQNGDWFKDGMKLEAIDPLNLSAICVATVRKVLADGYLMIGIDGSEAADGSDW-FCY- 456

  Fly  1003 LWVHITSPYIHPCGWHEGRQQLIVPP-DYQKSAFIWDDYISEVGGMAASKELFTPRQPME-YQER 1065
               |.|||.|.|.|:.|.....:.|| ...|..|.|.||:.|:|.:||..:||....|.. ::..
Zfish   457 ---HSTSPSIFPVGFCEINSIELTPPRGCTKLPFKWFDYLREIGSIAAPVKLFNKDVPNHGFRVG 518

  Fly  1066 MKLEVVDQRNPCLIRPATVVTRKGYR-VQLHLDCWPTEYYFWLEDDSPDLHPIGWCEATSHELET 1129
            ||||.||...|.|:..|| |||..:| :::|.|.|..||..|::.:||||:|||||:.|.::|:.
Zfish   519 MKLEAVDLMEPRLVCVAT-VTRIVHRLLRIHFDGWEDEYDQWVDCESPDLYPIGWCQLTGYQLQP 582

  Fly  1130 PPGYL---QPKSVMPCDVEGCRGFGNAKRFNLNV--------HALRECC-----PYAPENWRQWR 1178
            |....   .|.:|.....:..:..|..|:..:.|        ..||...     ...|.::....
Zfish   583 PAAQTTREAPPNVSKQKKKAAQYKGQKKKRKIPVGRRPIGLGGPLRRRSFSGDEEQTPPHYLSHF 647

  Fly  1179 SKTVKPPRVAPENIRRGWAKKTKRACSEAKQAIKEDSQQEIVYPKVAE 1226
            |.:.:||....|        :.:...|||...:||::      |::.|
Zfish   648 SGSRRPPASGVE--------RDRSLNSEASLQVKEET------PEIDE 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091 29/143 (20%)
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092 38/99 (38%)
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093 32/73 (44%)
SAM_PNT 1278..1367 CDD:460486
mbtd1XP_005169539.3 None
Blue background indicates that the domain is not in the aligned region.

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