DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and Phc2

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_061244.1 Gene:Phc2 / 54383 MGIID:1860454 Length:850 Species:Mus musculus


Alignment Length:274 Identity:55/274 - (20%)
Similarity:87/274 - (31%) Gaps:96/274 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 RGTTLILAGTLFNM-VAMGALMRDPEWMIEESRL-----------------ESRAQSIQTFSNSS 352
            |....||..||..| |.|...:.:|| .:::.||                 |.|||         
Mouse   127 RECACILFRTLSRMDVGMYGALPEPE-TVDQLRLLFTMGSLHPAFSFYQREELRAQ--------- 181

  Fly   353 VYLDEIKKLIETGIP------KEHVLD-TLVTNVNTEANQAIPPEDPAMTKKYSSEVALPTFFSE 410
              ||.:::..:...|      :|...| ||.:|.|...:.....|...:.|....|:::      
Mouse   182 --LDRLQRWSQFSRPGFLCPHREDDGDWTLCSNANPHLSSTSQREVVHIEKIILKEISV------ 238

  Fly   411 QEQHGAGGGGPRAGGGNLHASHRSLRHNVLTKETFKRSGRLAQAK-ARLASTETLNSYEKLSD-- 472
                         ||...|.|.                    :.| :..:|:....|:.:|.|  
Mouse   239 -------------GGDGRHYSF--------------------EVKWSDSSSSAVTKSHRELEDFL 270

  Fly   473 -EEEHEHHPDGVSLGIHASLKTLSVASLEDGYLSEKRAQELHVKAGGSTWSLDEVA--------L 528
             :...|..|.|...||        |..|..|...|.|..|.:::....:.|.|.:.        |
Mouse   271 LKLPKEQSPGGFEKGI--------VKLLSRGDQCESRDLERNLREKFLSLSQDVLRRCDISRFFL 327

  Fly   529 AGSLVVPSPHGDAA 542
            :.:.|:|..|..:|
Mouse   328 SDASVLPCSHCTSA 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768 20/118 (17%)
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093
SAM_PNT 1278..1367 CDD:460486
Phc2NP_061244.1 Disordered. /evidence=ECO:0000269|PubMed:27827373 1..79
Interaction with BMI1. /evidence=ECO:0000269|PubMed:27827373 33..56
PHA03247 <216..540 CDD:223021 30/173 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..314 21/127 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..386 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 402..436
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 528..553
HD1 550..579
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 597..624
PHC2_SAM_assoc 662..781 CDD:465202
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 676..712
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 725..764
SAM_Ph1,2,3 781..849 CDD:188976
Blue background indicates that the domain is not in the aligned region.

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