DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and phc1

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_991270.2 Gene:phc1 / 403008 ZFINID:ZDB-GENE-081022-39 Length:897 Species:Danio rerio


Alignment Length:809 Identity:159/809 - (19%)
Similarity:260/809 - (32%) Gaps:292/809 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PLSMASAEAKQLQRNISLSMSPANGGV-----ISPSTANCNGVASAS---GGNPNPNSLLTL--- 56
            |.:.||......|..::||.:.|.|.:     |.|:|:..:...|.|   |||......:.|   
Zfish    91 PNNSASQPTSSAQCTVNLSTTSAGGTMTNPRPIGPATSAASTALSQSVLLGGNSGGQGQMYLRVN 155

  Fly    57 ----APRKEELRFLPLAPMGGNKTCNI-TISNVQPMK--SKLKSVNIVPNSIKSAG--------- 105
                ||...:|.|:|    ||..|..: |::..||.:  .:.:.....|.|..|..         
Zfish   156 RSLRAPLTPQLIFMP----GGTATATVATVAQTQPQQQPQQQQQQEATPTSSSSQSDNDQVQNLA 216

  Fly   106 -------AGATVGSADA---------PLFQLVPSP----------------------------SN 126
                   ..|||.:..|         ||.|...:|                            :|
Zfish   217 MRCVSTPRAATVKTEFADRKETTGTFPLNQQTQTPQQFGQSTQQVQPQTQPLANAKLQSFSNTAN 281

  Fly   127 PSQPLVAILAPNRKTTLL--GGGASNGQP-----------VVIRSGTPLHK-----------NSL 167
            ||.|.:.: .||.::.:.  ..|||:..|           .::.|.:.||:           ..:
Zfish   282 PSVPALNV-KPNNQSAVAPQQAGASSNPPSSSPTPSLPLSQLLLSQSGLHQTRGVPASTATVTHI 345

  Fly   168 TVETSNKP-----------------------IQP----GGSAAAAAVGGGTGGAPL---TLVGKT 202
            .|.|||.|                       :||    |.:.:...:..|||..|:   |..|..
Zfish   346 LVPTSNVPTSTQGYPLGTVATKSNMTAQTLVVQPLQQTGANLSTEKLAHGTGHVPIQPKTAQGHR 410

  Fly   203 V--------------VPPKIQAAT----PVQIPSTGPGAQVSLLANP------------------ 231
            |              .||....||    |..:|....||:.|.|.|.                  
Zfish   411 VPVQMSPRHPPPILPAPPNNGQATAGLHPPHVPVQLVGARQSTLGNSQALALAQARTCCSQQDGT 475

  Fly   232 ----LKPRAPLILSKVAVD-----------KLRLKFSQVKSNPNALVLGKANHVKKLLTSPNPSG 281
                :.....::....|:|           :..|..||:::|.:|           :||..||:.
Zfish   476 AAVGVNNPGNVVTMVTAMDTSGAGMCLKTAQSALPISQMQTNQSA-----------VLTQGNPAS 529

  Fly   282 EDKTRSTQKNNKQN----TSASQLKPVVAP---KTAMPIATEVPTADNNKMSLIKSKPVAIKAVP 339
            ...:...|.|:..:    ::.:|:||.:.|   |:...:..|:   .|..:|  .|..:...|.|
Zfish   530 VTHSMDGQNNSGDSLFVQSAQAQIKPAIGPIKRKSESDLTHEI---SNEPIS--GSPSMQDSAPP 589

  Fly   340 L-PSQEAPIVPAVAPVVTSPEKVDVKPTAKPSIKTAPKPTPKPLEMSVNGPAKEKKAPAKEQKQK 403
            | |:.....||.:|  .:||      ||...|:   |.|.|:       |..:..:||..:    
Zfish   590 LSPAPSLDTVPEIA--FSSP------PTLSLSL---PVPLPR-------GAGQGDRAPVPQ---- 632

  Fly   404 TMDKPPVVKEIAQHTPCGPKELPKLKRSKSFVSNHPASPVANNERRHSVAIMAKEVDVIEQPSAA 468
            .:.||.|:..:.:                .||....|.|       ..|....||:      |.|
Zfish   633 AVVKPQVLTHLIE----------------GFVIQEGAEP-------FPVTGPLKEL------SGA 668

  Fly   469 IETITIEDDDESEEEQQKPEIKKTPKQNQKPEKQ----EAPKKKQIPM------------PILPA 517
            :..|...:|..|::.:.:..:...|....:..|:    ...|:..:..            ...||
Zfish   669 VPPILHPEDIRSDKLKCEYCLNFAPASQFRRSKRFCTISCSKRYNVSFRNHLRASRGLEGAERPA 733

  Fly   518 GITISTTSTAKKKAVRKNSSVTTISSSS---------SDSSSYSDVEVVPTKKTEKELSMLPGIS 573
            |..:.....|:::|.|::||....:..:         |:||...|:.....::.|..||:.|..:
Zfish   734 GGPVVQDVIARRRAPRRSSSEIACAKITGRHLPVKCRSESSRSDDISSCEGEEEEDFLSLSPSST 798

  Fly   574 IIKAESLPLSREDFERSLRCDEQVPQTPP 602
            .    |.|       |...|..|:..|.|
Zfish   799 F----SCP-------RPTHCGPQLDDTAP 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768 21/95 (22%)
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093
SAM_PNT 1278..1367 CDD:460486
phc1NP_991270.2 None
Blue background indicates that the domain is not in the aligned region.

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