DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment l(3)mbt and Scml2

DIOPT Version :9

Sequence 1:	NP_733209.1	Gene:	l(3)mbt / 43288	FlyBaseID:	FBgn0002441	Length:	1477	Species:	Drosophila melanogaster
Sequence 2:	XP_038956122.1	Gene:	Scml2 / 367793	RGDID:	1564289	Length:	1063	Species:	Rattus norvegicus

Alignment Length:	212	Identity:	78/212 - (36%)
Similarity:	106/212 - (50%)	Gaps:	6/212 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly   819 FRWSEYLKSKGKDVAAPIHLFLNPFPISPNCFEIGMKLEAIDPENCSLFCVCSIVEVRGYRLKLS 883
            |.|.:|||..| .|:||...|........|.|:|||||||.||.|....||.|::.:.|.||:|.
  Rat    46 FDWDKYLKETG-SVSAPSEYFRQAKTPPTNEFQIGMKLEARDPRNIDSVCVASVIGITGARLRLR 109

  Fly   884 FDGYSSMYDFWVNADSQDIFPPGWCDETARVLQAPKDYNSERFSWSRYLVK--TGGKAAPRALFG 946
            .||..:..|||...||.||.|.|.|::...:||.|..|.....||..:|::  ||.:.||...|
  Rat   110 LDGGDNKNDFWRLVDSSDIQPVGTCEQEGDLLQPPLGYRMNASSWPMFLLRVLTGSELAPAVFF- 173

  Fly   947 HLNMQQQMDVRNGFAVGMHLEAEDLNDTGKICVATVTDILDERIRVHFDGWDDCYDLWVHITSPY 1011
              ..:.....:|.|.|||.:||.|..:...||.||:..:..:::.:.||||...:|.|....|..
  Rat   174 --KKEPPRPPQNNFIVGMKIEAIDRKNPFMICPATIGAVSGDQVHITFDGWSGAFDYWCSYDSRD 236

  Fly  1012 IHPCGWHEGRQQLIVPP 1028
            |.|.||......::.||
  Rat   237 IFPVGWCRLTGDILQPP 253

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
l(3)mbt	NP_733209.1	MBT	822..918	CDD:214723	41/95 (43%)
		MBT	929..1028	CDD:214723	29/100 (29%)
		MBT	1038..1130	CDD:214723
		SAM_PNT	1279..1366	CDD:280377
Scml2	XP_038956122.1	MBT	49..144	CDD:214723	41/95 (43%)
		MBT	162..253	CDD:214723	28/93 (30%)
		rplD	676..>765	CDD:184900
		SLED	806..915	CDD:403384
		SAM_Scm	991..1061	CDD:188977
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166343708
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840