DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and Sfmbt

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster


Alignment Length:1221 Identity:249/1221 - (20%)
Similarity:409/1221 - (33%) Gaps:442/1221 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 AIETITIED-----------DDESEEEQQKPEI-------------------------KKTPKQN 496
            |:|.:..:|           ||...|.:.|.||                         .|...|:
  Fly   130 AMEAVVDDDDQVYGQRDNNFDDNGSELEPKQEIINIDDFVMMNEDNNSYDGTDFMTSSDKDISQS 194

  Fly   497 ------QKPEKQEAPKKKQ---IPMP------------ILPA----------GITISTTSTAKKK 530
                  |.|.....|..:.   :|:|            ::||          .|.:||.:|:.|:
  Fly   195 SSSCMAQMPGSLGVPGVEHDLLVPLPDGLLHHKLLGTTLVPAMGTLNGNAFGNIMVSTENTSSKQ 259

  Fly   531 AVR-------KNSSVTTISSSSSDSSSYSDVEVVPTKKTEK-ELSMLPGISI---------IKAE 578
            ..|       .||:.||.:.|:|.||:...     .:||.| |....||:.:         |...
  Fly   260 MQRTYSTAKGANSTATTATCSASTSSALRS-----QRKTRKIEPVNRPGLVLKTPIAYRGNIDPS 319

  Fly   579 SLPLSREDFERSLRCDE-QVPQT-PPKS----SSSSSSGSHASEMSPPPKLADPKPSSPPAKNAK 637
            .:|:.::......||.. .|..| ..||    |.:.:.|...|.:.......|...:|.|     
  Fly   320 VIPIQKDGMAVCKRCGAIGVKHTFYTKSRRFCSMACARGELYSLVLNTKMEGDQATTSSP----- 379

  Fly   638 KANDHDANPSPSSKTNDFKKSMMQNLNMLKWRGQQPANLQNSTVRFEL-NEFNFLQINERCQPRQ 701
                   :|...|::.|......|:.:.:: .....|:::|:..||.: ::....|:|...:|..
  Fly   380 -------DPGAGSESADLPGDQQQSQSDIE-LDLHAAHIKNANYRFRITDQSKITQLNSFGEPMS 436

  Fly   702 --GPAAYFERPLYDRPGRRPSACVHPLLYLCQRCNFHGPAAD--FLAPHFCSVGCVRRSQKRRLP 762
              |.||                           .|....|||  ..|.:..:||      ....|
  Fly   437 MGGDAA---------------------------ANNVQMAADETIAALNGGAVG------DATAP 468

  Fly   763 QSTQKESKISRTQLEQTAGTAP-------------DLPQKRQTNYKP------HKSLSAIQEQLQ 808
            .||::.:....:.|  :|...|             ||||..:....|      .|.:|     ::
  Fly   469 GSTEEGASTPNSYL--SAAPTPKALRLFKDIYPQDDLPQIPKYERLPVPCPQMEKIIS-----IR 526

  Fly   809 QRQKDKPRKPFRWSEYLKSKGKDVAAPIHLFLNPFPISPNC-----FEIGMK----------LEA 858
            :|..| |...:.|...| ||....|||:    ..||.:|.|     ..:|||          :|.
  Fly   527 RRMYD-PTHSYDWLPRL-SKENFNAAPV----TCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEV 585

  Fly   859 IDP-ENCSLFCVCSIVEVRGYRLKLSFDGY-SSMYDFWVNADSQDIFPPGWCDETARVLQAPKDY 921
            |.| :..:.|.|.:|:|::||:..:|::|: :..:|||||..:.::...|||....:.|..|:..
  Fly   586 IQPGQTPTSFWVATILEIKGYKALMSYEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTI 650

  Fly   922 NSERFSWSRYLV--KTGGKAAPRALFGHLNMQQQMDVRNGFAVGMHLEAEDLNDTGKICVATVTD 984
            ..:...|..:||  .:|.:..|...:..:|...|    :.|.:|::||..|.:...::.:||||.
  Fly   651 EHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQ----SRFRLGLNLECVDKDRISQVRLATVTK 711

  Fly   985 ILDERIRVHFDGWDDCYDLWVHITSPYIHPCGW-----HE-------------GRQQLI------ 1025
            |:.:|:.:.:...||.:  |.|..||.|||.||     |.             ||:.:|      
  Fly   712 IVGKRLFLRYFDSDDGF--WCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIEVHEDD 774

  Fly  1026 ----------------------------------------------------------------- 1025
                                                                             
  Fly   775 ATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPD 839

  Fly  1026 -----------------------------VPPD-YQKSAFIWDDYISEVGGMAASKELFTPRQPM 1060
                                         .||: |....|.|:.|:.:.|.:||.:.||....|.
  Fly   840 ASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAVAAGQHLFHRIIPD 904

  Fly  1061 E-YQERMKLEVVDQRNPCLIRPATVVTRKGYRVQLHLDCWPTEYYFWLEDDSPDLHPIGWCEATS 1124
            . ::..|.||..|..:|.|:..|||....|..:::|.|.|..||..||:.:|.|::|:|||...:
  Fly   905 HGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPVGWCVLVN 969

  Fly  1125 HELETPPGYLQPKSVMPCDVEGCRGFGNAKRFNLNVHALRECCPYAPENWRQWRSKTVKPPRVAP 1189
            |:||.||                                              |....:.|:.||
  Fly   970 HKLEGPP----------------------------------------------RVAHQQAPKPAP 988

  Fly  1190 E-NIRRGWAKKTKRACSEAK-------QAIKEDSQQEIVYPKVAEVVQAKRKTSPCEEKVVKKQK 1246
            : .|:|  .:|.|:..:..|       |::|..:......|.:.: :..|.:..|........:.
  Fly   989 KPKIQR--KRKPKKGAAGGKTPTDNNTQSVKSRTIALKTTPHLPK-LSIKLELKPEHHNAAFYEN 1050

  Fly  1247 QMQKEEDAEQVPD-------------ERSL-----------------------------AIARSF 1269
            ...:||..|:.||             |:|.                             .:.:|.
  Fly  1051 NQPEEEGDEEDPDADGDGDGSTSHISEQSTTQSSSDLIAGSGSGSGSASLVTLATGSNKTVKKST 1115

  Fly  1270 VKDYGP--------QFLPNYRLWQLNSAFKLDDVRTNPLH-------WTSWDVCEYIERALDSTD 1319
            .|...|        .::.|..........:|.|:.::..|       |..:||.::: |..|.|.
  Fly  1116 TKSPAPPTVGRKATSYIANSSATNNKYIPRLADIDSSEPHLELVPDTWNVYDVSQFL-RVNDCTA 1179

  Fly  1320 IAKVIFEQDIDGRALLMLGRKELDTYLKLKVGPAVKLYSLILNLRIAVVCK 1370
            .........|||:.||.|.:.::...|.:|||||:|:..||..|:    ||
  Fly  1180 HCDTFSRNKIDGKRLLQLTKDDIMPLLGMKVGPALKISDLIAQLK----CK 1226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091 31/117 (26%)
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092 32/206 (16%)
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093 27/72 (38%)
SAM_PNT 1278..1367 CDD:460486 26/95 (27%)
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109 28/107 (26%)
MBT_dSfmbt_rpt2 674..753 CDD:439112 25/84 (30%)
MBT_dSfmbt_rpt3 798..904 CDD:439115 11/105 (10%)
MBT_dSfmbt_rpt4 905..976 CDD:439118 26/70 (37%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 22/70 (31%)
Blue background indicates that the domain is not in the aligned region.

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