DRSC/TRiP Functional Genomics Resources

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Protein Alignment: l(3)mbt and SAMD11

Sequence 1:NP_733209.1 Gene:l(3)mbt FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_689699.2 Gene:SAMD11 HGNCID:28706 Length:681 Species:Homo sapiens

Alignment Length:99 Identity:31/100 (31%)
Similarity:49/100 (49%) Gaps:6/100 (6%)


  Fly  1302 WTSWDVCEYIERALDSTDIAKVIFEQDIDGRALLMLGRKELDTYLKLKVGPAVKLYSLILNL--R 1364
            ||..|||.::.......:..:|..||.|||..|.:|..:.|.|.:.||:|||:|:.:.:...  |
Human   543 WTVDDVCSFVGGLSGCGEYTRVFREQGIDGETLPLLTEEHLLTNMGLKLGPALKIRAQVARRLGR 607

  Fly  1365 IAVVCKFDSKNIELESNTAGPIQREMDT---PVS 1395
            :..|..|... :.|:..|....:||:.|   |:|
Human   608 VFYVASFPVA-LPLQPPTLRAPERELGTGEQPLS 640

Known Domains:


GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 MBT 822..918 CDD:214723
MBT 929..1028 CDD:214723
MBT 1038..1130 CDD:214723
SAM_PNT 1279..1366 CDD:280377 22/66 (33%)
SAMD11NP_689699.2 SAM_Samd7,11 540..607 CDD:188978 21/64 (33%)
SAM 540..597 CDD:197735 21/54 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C87356416
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR12247
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.030

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