DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and Phc1

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:XP_006505561.1 Gene:Phc1 / 13619 MGIID:103248 Length:1040 Species:Mus musculus


Alignment Length:878 Identity:185/878 - (21%)
Similarity:296/878 - (33%) Gaps:271/878 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ASAEAKQL----QRNISLSMSPANGGVISPSTANCNGVASASGGNPNPNSLLTLAPRKEELRFLP 67
            |||:..|:    |:.|....||.:|  :|.:::....||.||.|....:              |.
Mouse   245 ASAQGPQMPGSTQKAIPPGASPVSG--LSQTSSQALAVAQASSGASGQS--------------LN 293

  Fly    68 LAPMGGNKTCNITISNVQPMKSKLKSVNIVPNSIKSAGAGATVGSADAPLFQLVPSPSNPSQPLV 132
            |:..||.                  |.|.:|.|:...|.|...|.    |.||      ||..|.
Mouse   294 LSQAGGG------------------SGNSLPGSMGPGGGGQAPGG----LGQL------PSSGLT 330

  Fly   133 AILAPNRKTTLLGGGASNGQPVVIRSGTPLHKNSLTVETSNKPIQPGGSAAAAAVGGGTG----G 193
            ....|.:.|.::       ||:.......:.:.|.|...|        :||..|...|:|    |
Mouse   331 GGSCPRKGTGVV-------QPLPAAQTVTVSQGSQTEAES--------AAAKKAEADGSGQQSVG 380

  Fly   194 APLTLVGKTVVPPK----IQAATPVQIPSTGPGAQVSLLANP----LKPRAPLILSKVAVDKLRL 250
            ..||   :|..|..    |.:||..||...      ||:...    |:.:..:|..::|:.. :.
Mouse   381 MNLT---RTATPAPSQTLISSATYTQIQPH------SLIQQQQQIHLQQKQVVIQQQIAIHH-QQ 435

  Fly   251 KFSQVKSNPNALVLGKANHVKKLLTSPNPSGEDKTRSTQKNNKQNTSASQLKPVVAPKTAMPIAT 315
            :|...:|.    :|..|.|::  |.......:.:.:..|:..:|....:.|.....|:  :|...
Mouse   436 QFQHRQSQ----LLHTATHLQ--LAQQQQQQQQQQQQQQQQQQQQQQGTTLTAPQPPQ--VPPTQ 492

  Fly   316 EVPTADNNKMSLIKSKPVAIKAVPLPSQEAPIVPAVAPVV-TSPEKVDVKPTAKPSIKTAPKPTP 379
            :||                    |..||:......|.|:: :||..:..:||:||.|....||..
Mouse   493 QVP--------------------PSQSQQQAQTLVVQPMLQSSPLTLPPEPTSKPPIPIQSKPPV 537

  Fly   380 KPLEMSVNGPAKEKKAPAKEQKQKTMDKPPVVKEIAQHTP---CGPKELPKLKRSKSFVSNHPAS 441
            .|::....|.||         ...|...||       |.|   .|.::              |.|
Mouse   538 APIKPPQLGAAK---------MSATQQPPP-------HIPVQVVGTRQ--------------PGS 572

  Fly   442 PVANNERRHSVAIMAKEVDVIEQPSAAIET---ITIEDDDESEEEQQKPEIKKTPKQNQKPEKQE 503
            ..|             :...:.|.:||:.|   ||      ...:..:..:..:|     |..|.
Mouse   573 AQA-------------QALGLAQLAAAVPTPRGIT------GAVQPGQAHLASSP-----PSSQA 613

  Fly   504 APKKKQIPMPILPAGITIS----TTSTAKKKAVRKNSSVTTISSSSSDSSSYSDVEVVPTKKTEK 564
            ||...|...|.|.||:|::    |....|......:..|..:.::....|.:             
Mouse   614 APGALQECPPALAAGMTLAPVQGTAHVVKGGPTASSPVVAQVPAAFYMQSVH------------- 665

  Fly   565 ELSMLPGISIIKAESLPLSREDFERSLRCD------------EQVPQTPPKSSSSSSSGSHASEM 617
                |||    ||::|.:.|:......|.|            ....::|......:|.|..|..:
Mouse   666 ----LPG----KAQTLAVKRKAESEEERDDLSALASVLPTKASPAAESPKVIEEKNSLGEKAEPV 722

  Fly   618 SP----PPK-----LADPKPSSPPAKNAKKAND-HDANP-----SPSSKTNDFKKSMMQNLNMLK 667
            :.    ||.     || |.||:||...|..:.. .|:.|     .|...|:..:..::|      
Mouse   723 ASLNANPPNSDLVALA-PTPSAPPPTLALVSRQMGDSKPPQAIVKPQILTHIIEGFVIQ------ 780

  Fly   668 WRGQQPANLQNSTVRFELNEFNFLQINERCQPRQG--PAAYFE-RPLYDRPGRRPSACVHPL--L 727
             .|.:|         |.:....||:  |..:|.|.  |....| :|.....|..||..:...  |
Mouse   781 -EGAEP---------FPVGCSQFLK--ETKKPLQAGLPTGLNESQPSGPLGGDSPSVELEKKANL 833

  Fly   728 YLCQRCNFHGPAADFL-APHFCSVGCVRR-----SQKRRLPQSTQK---ESKISRTQLEQTAGTA 783
            ..|:.|..:.||..|. :..|||:.|.:|     |.:.||.:...|   |:..:|.:......::
Mouse   834 LKCEYCGKYAPAEQFRGSKRFCSMTCAKRYNVSCSHQFRLKRKKMKEFQEASYARVRRRGPRRSS 898

  Fly   784 PDLPQKRQTNYKPHKSLSAIQEQLQQRQKDKPR 816
            .|:.:.:            ||.:..:.|:|..|
Mouse   899 SDIARAK------------IQGKRHRGQEDSSR 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768 24/98 (24%)
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093
SAM_PNT 1278..1367 CDD:460486
Phc1XP_006505561.1 PHA03247 <509..639 CDD:223021 41/183 (22%)
PHC2_SAM_assoc 864..971 CDD:465202 12/68 (18%)
SAM_Ph1,2,3 971..1039 CDD:188976
Blue background indicates that the domain is not in the aligned region.

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