DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and SCML2

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:NP_006080.1 Gene:SCML2 / 10389 HGNCID:10581 Length:700 Species:Homo sapiens


Alignment Length:750 Identity:185/750 - (24%)
Similarity:271/750 - (36%) Gaps:240/750 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   788 QKRQTNYKPHKSLSAIQEQLQQRQKDKPRKPFRWSEYLKSKGKDVAAPIHLFLNPFPISP-NCFE 851
            :|......|..|.|::|           |..|.|.||||..| .::||...| ....|.| |.|:
Human    13 KKENQEKTPQSSTSSVQ-----------RDDFHWEEYLKETG-SISAPSECF-RQSQIPPVNDFK 64

  Fly   852 IGMKLEAIDPENCSLFCVCSIVEVRGYRLKLSFDGYSSMYDFWVNADSQDIFPPGWCDETARVLQ 916
            :||||||.||.|.:..|:.:::.:.|.||:|..||..:..|||...||.||.|.|.|::...:||
Human    65 VGMKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQ 129

  Fly   917 APKDYNSERFSWSRYLVKT--GGKAAPRALFGHLNMQQQMDVRNGFAVGMHLEAEDLNDTGKICV 979
            .|..|.....||..:|:||  |.:.|...||   ..:......|.|.|||.|||.|..:...||.
Human   130 PPLGYQMNTSSWPMFLLKTLNGSEMASATLF---KKEPPKPPLNNFKVGMKLEAIDKKNPYLICP 191

  Fly   980 ATVTDILDERIRVHFDGWDDCYDLWVHITSPYIHPCGWHEGRQQLIVPP---------------- 1028
            ||:.|:..:.:.:.||||...:|.|....|..|.|.||......::.||                
Human   192 ATIGDVKGDEVHITFDGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGTSVPIVKNIAKTESS 256

  Fly  1029 ----------DYQKSAFIW-------DDYISEVGGMAASK-----ELFTPRQ--PMEYQERMKLE 1069
                      ..||:..|.       ...|...|..|..|     :..|||:  |...::...|.
Human   257 PSEASQHSMQSPQKTTLILPTQQVRRSSRIKPPGPTAVPKRSSSVKNITPRKKGPNSGKKEKPLP 321

  Fly  1070 VVDQRN---------------------PCLIRPATV---VTRKGYRVQLHLDCWPTEYYFWLEDD 1110
            |:...:                     ||.|..:||   |.:.| ....|||  |...     ..
Human   322 VICSTSAASLKSLTRDRGMLYKDVASGPCKIVMSTVCVYVNKHG-NFGPHLD--PKRI-----QQ 378

  Fly  1111 SPDLH----PIG--------WCEATSHELETPPGYLQPKS----VMPCDVEG---------CRGF 1150
            .|| |    |:.        .|...:.|.:|..|||:|.:    |:....:|         ....
Human   379 LPD-HFGPGPVNVVLRRIVQACVDCALETKTVFGYLKPDNRGGEVITASFDGETHSIQLPPVNSA 442

  Fly  1151 GNAKRFNLN-VHALRECC-------PY------------------APENWRQWRSKTVKP----P 1185
            ..|.||..| .|:|:  |       |:                  |.|:..:.:|....|    |
Human   443 SFALRFLENFCHSLQ--CDNLLSSQPFSSSRGHTHSSAEHDKNQSAKEDVTERQSTKRSPQQTVP 505

  Fly  1186 RVAPENIRRGWAKKTKRACSEA------------KQAIKEDSQQE----------------IVYP 1222
            .|.|.:.:   ..|||...||.            ::.:.|||:..                .::.
Human   506 YVVPLSPK---LPKTKEYASEGEPLFAGGSAIPKEENLSEDSKSSSLNSGNYLNPACRNPMYIHT 567

  Fly  1223 KVAE--------------VVQAKRKTSPCEEKVVKKQKQMQKEEDAEQ---VPDERSLAIARSFV 1270
            .|::              |.....|:||.|.|.     |||::.:|..   |||..  .:.:.|.
Human   568 SVSQDFSRSVPGTTSSPLVGDISPKSSPHEVKF-----QMQRKSEAPSYIAVPDPS--VLKQGFS 625

  Fly  1271 KDYGPQFLPNYRLWQLNSAFKLDDVRTNPLHWTSWDVCEYIERALDSTD------IAKVIFEQDI 1329
            ||                          |..|:..:|.::::.    ||      :|.:..:.:|
Human   626 KD--------------------------PSTWSVDEVIQFMKH----TDPQISGPLADLFRQHEI 660

  Fly  1330 DGRALLMLGRKELDTYLKLKVGPAVKLYSLILNLR 1364
            ||:||.:|....:..|:.||:|||:||...|..|:
Human   661 DGKALFLLKSDVMMKYMGLKLGPALKLCYYIEKLK 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091 40/101 (40%)
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092 31/120 (26%)
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093 20/109 (18%)
SAM_PNT 1278..1367 CDD:460486 22/92 (24%)
SCML2NP_006080.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 6/30 (20%)
MBT 33..162 CDD:459242 53/133 (40%)
MBT 1 33..131 42/99 (42%)
MBT 2 139..240 34/103 (33%)
MBT_SCML2_rpt2 167..243 CDD:439099 27/75 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..320 11/66 (17%)
RBR 277..324 CDD:465382 10/46 (22%)
SLED 356..465 CDD:463469 28/119 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..550 16/86 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 575..594 2/18 (11%)
SAM_Scm 625..696 CDD:188977 24/100 (24%)
Blue background indicates that the domain is not in the aligned region.

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