DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and l3mbtl1

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:XP_031750143.1 Gene:l3mbtl1 / 100495734 XenbaseID:XB-GENE-949999 Length:757 Species:Xenopus tropicalis


Alignment Length:875 Identity:263/875 - (30%)
Similarity:389/875 - (44%) Gaps:195/875 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   554 VEVVPTK-KTEKELSMLPGISIIKAESLPLSREDFERSLRCDEQVPQTPPKSSSSSSSGSHASEM 617
            ::::.|| |:|.|:|...|....:...|..|.:        .:.|.|.||         :.:|||
 Frog     1 MDLIVTKAKSEPEISAPSGKVTSEGTGLLASSQ--------TQAVVQLPP---------AFSSEM 48

  Fly   618 SPPPKLADPKPSSPPAKNAKKANDHDANPSPSSKTNDFKKSMMQNLNMLKWRGQQ---PANLQNS 679
            ..|.::  .|..:.|.|.|..|.              |.         .:|...|   |.:.|::
 Frog    49 QHPQQM--EKKGAEPVKVAVNAR--------------FP---------FRWSEPQEGIPRSPQDN 88

  Fly   680 TVRFELNEFNFLQINERCQPRQGPAAYFERPLYDRPGRRPSACVHPLLYLCQRCNFHGPAADFLA 744
            .:  |:.|.::...::..:.|.|........|.|..|     |.|.:...|:.|   |....|..
 Frog    89 PI--EVQETDYQTSSQDAEGRTGSPTDSGLSLCDTCG-----CRHMVGGTCETC---GDICGFKE 143

  Fly   745 PHFC------------SVGCVRRSQKRRLPQSTQK--ESKISRTQLEQTAGTAPDLPQKRQTNYK 795
            ...|            ..|...:..|:|.|:..|.  ||:...||.|          ||...:.:
 Frog   144 SVHCRSLVMETSLVFGGGGETPKPVKKRRPKEYQSPAESEAEFTQKE----------QKSTGHIE 198

  Fly   796 PHKSLSAIQEQLQQR----QKDKPRKPFRWSEYLKSKGKDVAAPIHLFLNPFPIS---PNCFEIG 853
            ...:.|.::|:..||    ..|:..:|:.||.|| .:.|.:|||::|| ..:.:.   .|.|::|
 Frog   199 ESLARSCVKEEWSQRDIRVSGDELGEPWSWSTYL-DELKCIAAPLNLF-REWQLGAQHKNSFKVG 261

  Fly   854 MKLEAIDPENCSLFCVCSIVEVRGYRLKLSFDGYSSMYDFWVNADSQDIFPPGWCDETARVLQAP 918
            ||||.|||::.||:.:.::.||.|:|::|.|||||..:||||||||.||.|.|||:.|...||.|
 Frog   262 MKLEGIDPQHPSLYFILTVTEVCGFRIRLHFDGYSDCHDFWVNADSPDIHPAGWCERTGHKLQPP 326

  Fly   919 KDYNSERFSWSRYLVKTGGKAAPRALFGHLNMQQQMDVRNG-----FAVGMHLEAEDLNDTGKIC 978
            |.|..|.|||:.||.:|....||:.||        :..:.|     |.|||.|||.|..:...||
 Frog   327 KGYKDEDFSWTNYLRQTKAPVAPKHLF--------VTPKIGAPPSLFRVGMKLEAVDRMNPSLIC 383

  Fly   979 VATVTDILDERIRVHFDGWDDCYDLWVHITSPYIHPCGWHEGRQQLIVPP-DY-QKSAFIWDDYI 1041
            ||:|||::::|..||||.|.|.||.|...:|||:||.||.|..::::.|| || ....|.|..|:
 Frog   384 VASVTDVIEDRFLVHFDNWGDTYDYWCDPSSPYVHPVGWCEQHEKILTPPQDYPDPEGFSWGKYL 448

  Fly  1042 SEVGGMAASKELFTPRQPMEYQERMKLEVVDQRNPCLIRPATVVTRKGYRVQLHLDCWPTEYYFW 1106
            ||...:|...:.|.||.|..::..|:||.||:|:|.||..|:||..:.:|:::|.|.|...|.||
 Frog   449 SETKTVAVPAQAFHPRPPHGFKVDMRLEAVDRRSPSLICVASVVEVEEFRIKVHFDGWSHMYDFW 513

  Fly  1107 LEDDSPDLHPIGWCEATSHELETP----------PG-----------------Y-LQPKSVMPCD 1143
            |:.|.|||||.||.:.|.|.|:||          ||                 | ||.:.   |.
 Frog   514 LDADHPDLHPAGWSQRTGHPLQTPLRCRDVSNMSPGPCVSLSCKEMSHTRNNKYGLQHRK---CP 575

  Fly  1144 VEGCRGFGNAK-RFNLNVHALRECCPYAPENWRQWRSKTVKP---PRVAPENIRRGWAKKTKRAC 1204
            ..||.|.|:.. ||  ..|.....||.|..|....||:...|   .|.:..:.|.|...|.:|  
 Frog   576 TPGCDGSGHVTGRF--TAHHCLSGCPLADRNQNPTRSRNPIPFPSRRKSRHHGRIGRPPKYRR-- 636

  Fly  1205 SEAKQAIKEDSQQEIVYPKV---AEVVQAKRKTSPCEEKVVKKQKQMQKEEDAEQVPDERSLAIA 1266
                  :::||.|:.|:...   |..|...|..|.|.|:..:                       
 Frog   637 ------VQQDSYQDPVHQSFFMSALSVHPDRAHSHCWEQHCR----------------------- 672

  Fly  1267 RSFVKDYGPQFLPNYRLWQLNSAFKLDDVRTNPLHWTSWDVCEYIERALDSTDIAKVIFEQDIDG 1331
                      .||.......::..|          |::.:|..:::......|.|::..|:.|||
 Frog   673 ----------LLPGVAGISASTVSK----------WSTEEVFSFVQTLTGCEDQARLFREEMIDG 717

  Fly  1332 RALLMLGRKELDTYLKLKVGPAVKLYSLIL 1361
            :|||:|.:.::...|.:|:|||||:|:.||
 Frog   718 QALLLLTQTDIVKILCIKLGPAVKIYNSIL 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091 51/101 (50%)
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092 43/94 (46%)
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093 32/71 (45%)
SAM_PNT 1278..1367 CDD:460486 25/84 (30%)
l3mbtl1XP_031750143.1 MBT_L3MBTL1_rpt1 245..353 CDD:439121 52/108 (48%)
MBT 360..452 CDD:459242 42/91 (46%)
MBT_L3MBTL1_rpt3 465..539 CDD:439127 34/73 (47%)
zf-C2HC 573..601 CDD:460240 10/32 (31%)
SAM_Scm-like-3MBT3,4 685..750 CDD:188981 23/73 (32%)
Blue background indicates that the domain is not in the aligned region.

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