DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)mbt and l3mbtl1

DIOPT Version :10

Sequence 1:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster
Sequence 2:XP_002666454.2 Gene:l3mbtl1 / 100321295 ZFINID:ZDB-GENE-090313-102 Length:815 Species:Danio rerio


Alignment Length:884 Identity:248/884 - (28%)
Similarity:359/884 - (40%) Gaps:219/884 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   602 PKSSSSSSS--GSHASEMSPP-------PKLADPKPSSPPAKNAKKA---NDHDANPSPSSKTND 654
            |..||.|.:  .|.|..:.|.       |..|.|.|.....:||.||   ::.:|...|:.....
Zfish    17 PSESSVSHAPIDSSAHRLKPQDTTTIIFPASAHPLPKVELPQNAIKAIKGSELEATSLPAQVGGT 81

  Fly   655 FKKSMMQNLNMLKWR-------GQQ--------------------PANLQNSTVRFELNEFNFLQ 692
            .       :::|.|:       |..                    |.||.....:.:.....|.|
Zfish    82 I-------VHVLGWKEGMAILPGSNLKLCVSDTGALEVISEGKIGPTNLPTEGAQMKPANMEFKQ 139

  Fly   693 INERCQPRQG----PAAYFERPLYDRPGRR----PSACVHPLLYLCQRC--NFH-----GPAADF 742
            . |:.....|    |||:.|.   ||..|.    ..:.||      .||  |.|     |.....
Zfish   140 A-EKSDVSAGGNGRPAAFLEA---DRLHRARIEVQDSPVH------SRCGQNMHMTELRGEPMSE 194

  Fly   743 LAPHFCSVGCVRRSQKRRLPQSTQKESKISRTQLEQTAGTAPDLPQKRQTNYKP----HKSLSAI 803
            :.........:.|......|...:|..:.:.             |.:..::.:|    .::|...
Zfish   195 IPAGLAEAQVMYREHDMMKPMKKRKRREYNS-------------PSEDDSDAEPMDEKSEALKID 246

  Fly   804 QEQLQQRQKDKPRKPFRWSEYLKSKGKDVAAPIHLF--LNPFPISPNCFEIGMKLEAIDPENCSL 866
            ..|::....:...:|:.|.:||:.: |.:|||:.||  ....|:..|.|..|||||.|||::.|:
Zfish   247 GRQIKTGSAETKLEPWSWPQYLELQ-KAIAAPVRLFQETQRVPLIRNSFRQGMKLEGIDPQHPSM 310

  Fly   867 FCVCSIVEVRGYRLKLSFDGYSSMYDFWVNADSQDIFPPGWCDETARVLQAPKDYNSERFSWSRY 931
            :.|.::.||.||||:|.|||||..:||||||:..||.|.|||:.||..|..||....|.||||.|
Zfish   311 YFVLTVAEVCGYRLRLHFDGYSDCHDFWVNANCADIHPAGWCESTAHKLHTPKGCKEEEFSWSNY 375

  Fly   932 LVKTGGKAAPRALFGHLNMQQQMDVRNGFAVGMHLEAEDLNDTGKICVATVTDILDERIRVHFDG 996
            |..|..:|||:.|| ..:::.:.|.  ||.|||.|||.|..:...||||||||.:.:|..||||.
Zfish   376 LKITRSQAAPKELF-ISSVKPETDC--GFEVGMKLEAVDRMNPSLICVATVTDRVADRFLVHFDN 437

  Fly   997 WDDCYDLWVHITSPYIHPCGW-HEGRQQLIVPPDY-QKSAFIWDDYISEVGGMAASKELFTPRQP 1059
            |||.||.|...:||||||.|| ||....|..|.|| :...|.|:.|:.|.|..|.:.|.|..|..
Zfish   438 WDDTYDYWCDSSSPYIHPIGWCHERGLPLTPPQDYPEVDRFSWERYLEETGSTAVAAEAFRVRPA 502

  Fly  1060 MEYQERMKLEVVDQRNPCLIRPATVVTRKGYRVQLHLDCWPTEYYFWLEDDSPDLHPIGWCEATS 1124
            ..:|.:||||.||:|.|.|||.|||.....||:::|.|.|...|..|::.|.||:||.||||:|.
Zfish   503 HSFQVQMKLEAVDKRCPGLIRVATVQEVDTYRIKIHFDGWSHLYDEWMDSDHPDIHPAGWCESTG 567

  Fly  1125 HELETPPGYLQPKSVMP-----------------------------------CDVEGCRGFGNAK 1154
            |.|:.||  .||....|                                   |...||.|.|:..
Zfish   568 HPLKPPP--CQPTVPKPGPRESLAVRQPSFSMSCKSLPQPRNTSKYSFHHRKCPTPGCDGSGHVT 630

  Fly  1155 -RFNLNVHALRECCPYAPENW--------------------------RQWRSKTVKPPRVAPENI 1192
             ||  ..|.....||.|..|.                          .::..:..:||:      
Zfish   631 GRF--TAHHCLSGCPLAERNQGRLKADLSDTEGSRRNLLVFGQRAKKSRYHGRIGRPPK------ 687

  Fly  1193 RRGWAKKTKRACSEAKQAIKEDSQQEIVYPKVAEVVQAKRKTSPCEEKVVKKQKQMQKEEDAEQV 1257
               :.|..:|.|    |::..:.....:: ..|....::|..|.|.|:..|              
Zfish   688 ---YRKSQQRNC----QSMTSEGMYSSLF-MTAFTANSERTLSLCWEQHCK-------------- 730

  Fly  1258 PDERSLAIARSFVKDYGPQFLPNYRLWQLNSAFKLDDVRTNPLHWTSWDVCEYIERALDSTDIAK 1322
                               .||..      :......|.|    ||..:|..::...:...:.|:
Zfish   731 -------------------LLPGV------AGIHAGQVAT----WTIEEVFGFVNNLIGCEEQAR 766

  Fly  1323 VIFEQDIDGRALLMLGRKELDTYLKLKVGPAVKLYSLIL 1361
            :..::.|||.:.|:|.:.::...:.:|:|||:|:::.||
Zfish   767 IFKDEMIDGESFLLLTQNDIVKIMNIKLGPALKIHNAIL 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)mbtNP_733209.1 PRK10819 <332..>427 CDD:236768
MBT_L3MBTL1-like_rpt1 846..945 CDD:439091 52/98 (53%)
MBT_L3MBTL1-like_rpt2 957..1045 CDD:439092 46/89 (52%)
MBT_L3MBTL1-like_rpt3 1058..1130 CDD:439093 34/71 (48%)
SAM_PNT 1278..1367 CDD:460486 20/84 (24%)
l3mbtl1XP_002666454.2 MBT_L3MBTL1_rpt1 281..389 CDD:439121 54/107 (50%)
MBT_L3MBTL1_rpt2 396..488 CDD:439124 47/93 (51%)
MBT_L3MBTL1_rpt3 501..575 CDD:439127 36/75 (48%)
zf-C2HC 617..645 CDD:460240 10/29 (34%)
SAM_Scm-like-3MBT3,4 743..808 CDD:188981 18/67 (27%)
Blue background indicates that the domain is not in the aligned region.

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