DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17991 and CG16781

DIOPT Version :10

Sequence 1:NP_651547.1 Gene:CG17991 / 43279 FlyBaseID:FBgn0039498 Length:294 Species:Drosophila melanogaster
Sequence 2:NP_001259211.1 Gene:CG16781 / 31315 FlyBaseID:FBgn0029661 Length:386 Species:Drosophila melanogaster


Alignment Length:316 Identity:116/316 - (36%)
Similarity:166/316 - (52%) Gaps:62/316 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ERCCWICFETDKEAGRQAWVNPCLCRGTNKWVHQSCISLWIDEKTRINNNLQAVSCPQCQTEYTI 84
            ||.|||||.|.::.....||.||.|||..|||||||:..||||| ::.:..|.|.|.||||||.:
  Fly    41 ERICWICFATSEDNPHAHWVQPCQCRGDTKWVHQSCLYRWIDEK-QLGDRRQTVICQQCQTEYIM 104

  Fly    85 AYPNLWIFDRALE--------LTNDLILTNLYNCLANVFTVVFAYWSAVSFGAKTYLQITGQEGH 141
            .:|.:....|.||        :...|:|.....|:         ||.|:::||.|.:|:.||: .
  Fly   105 VFPQMNPIARVLEKLDYAVRRICPFLVLGMFLCCI---------YWIALTYGAFTIIQVVGQD-R 159

  Fly   142 VHQIIQSGDLLVVLVGFPLISVVLILGRLIPWEDALLRFIRICYSLLRSLSMMCLGRK--YDHQT 204
            ..|:::  :.:::|||.|.|.|.|||.||:.|:||:|:.:|..|        :.:.||  :.|:|
  Fly   160 AMQLME--NKVILLVGLPFIPVGLILFRLVRWKDAVLKAMRSIY--------IYIPRKLPFFHRT 214

  Fly   205 E-----------------------------PYPSAP-MTE-YSASRVVCGAILLPTISMYVGRVL 238
            .                             |....| :|| :..||::|||..|||.:..||.|.
  Fly   215 NQSEGASRDLGDLGDLDDLSVSSSSSISLPPIQHNPSITEPFYISRLICGAFFLPTFATTVGNVF 279

  Fly   239 YSSVDDRLQQTLLGGLTFIAIKGFLKMYLMHSQYICRMKRRVLDYTKENLAEADGH 294
            :..:||.||:|:|||:.:|.|||.|||||....|:.|:.|.:|:||.||:...|.|
  Fly   280 FGRLDDALQRTILGGIAYIGIKGLLKMYLDQKLYLRRLGRCILNYTDENVRMIDQH 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17991NP_651547.1 RING_CH-C4HC3_MARCH5 21..82 CDD:438361 33/60 (55%)
CG16781NP_001259211.1 RING_CH-C4HC3_MARCH5 42..102 CDD:438361 33/60 (55%)

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