DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ser and jag1

DIOPT Version :10

Sequence 1:NP_524527.3 Gene:Ser / 43275 FlyBaseID:FBgn0004197 Length:1407 Species:Drosophila melanogaster
Sequence 2:XP_002931784.1 Gene:jag1 / 100486874 XenbaseID:XB-GENE-485662 Length:1218 Species:Xenopus tropicalis


Alignment Length:35 Identity:14/35 - (40%)
Similarity:15/35 - (42%) Gaps:9/35 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   720 SFGYSGPNN-----PNKWRRSDEPPQRQQRQQMGP 749
            ||||||...     |:|    ||..||..|....|
 Frog   496 SFGYSGMGKGQHRMPSK----DELVQRYNRMNTIP 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SerNP_524527.3 MNNL 83..238 CDD:462222
DSL 220..282 CDD:128366
EGF_CA 350..388 CDD:238011
EGF_CA 490..526 CDD:238011
EGF_CA 610..645 CDD:238011
EGF_CA 647..683 CDD:238011
EGF_CA 690..720 CDD:238011 14/35 (40%)
EGF_CA 798..833 CDD:238011
EGF_CA 879..913 CDD:238011
EGF_CA 916..952 CDD:238011
VWC_out <993..1053 CDD:214565
jag1XP_002931784.1 MNNL 32..185 CDD:462222
DSL 167..229 CDD:128366
EGF_CA 296..334 CDD:238011
EGF 340..370 CDD:394967
EGF_CA 374..410 CDD:238011
EGF_CA 412..447 CDD:238011
EGF_CA 450..485 CDD:238011
EGF_CA 487..523 CDD:238011 13/30 (43%)
EGF_CA 525..560 CDD:238011 1/2 (50%)
EGF_CA 629..665 CDD:238011
EGF_CA 667..702 CDD:238011
EGF 709..739 CDD:394967
EGF 748..778 CDD:394967
EGF_CA 782..817 CDD:238011
EGF_CA 820..856 CDD:238011
VWC_out 863..929 CDD:214565
Blue background indicates that the domain is not in the aligned region.

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