DRSC/TRiP Functional Genomics Resources

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Protein Alignment grass and Try4

DIOPT Version :10

Sequence 1:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster
Sequence 2:NP_035776.1 Gene:Try4 / 22074 MGIID:102757 Length:246 Species:Mus musculus


Alignment Length:263 Identity:80/263 - (30%)
Similarity:126/263 - (47%) Gaps:44/263 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 RVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRI 182
            ::..||..:.:|.|:...|     ......|||::|:::::::||||    .....::|||||.|
Mouse    23 KIVGGYTCRENSVPYQVSL-----NSGYHFCGGSLINDQWVVSAAHC----YKSRIQVRLGEHNI 78

  Fly   183 STEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPIT 247
            :..|...|            .|...|.:.|..:::|.:.:||.|:||...|.....:..:.||  
Mouse    79 NVLEGNEQ------------FVNSAKIIKHPNFNSRTLNNDIMLIKLASPVTLNARVATVALP-- 129

  Fly   248 DELKEKAEQISTYFVTGWGTTEN-GSSSDVLLQA-NVPLQPRSACSQAYRRAVPLSQLCVG---G 307
               ...|...:...::|||.|.: |.::..|||. :.||.|::.|..:|...:..:.:|||   |
Mouse   130 ---SSCAPAGTQCLISGWGNTLSFGVNNPDLLQCLDAPLLPQADCEASYPGKITNNMICVGFLEG 191

  Fly   308 GDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDTM 372
            |  :|||:||||||:....|..          ||||.| ..|.....||:||.|..||.||.:|:
Mouse   192 G--KDSCQGDSGGPVVCNGQLQ----------GIVSWG-YGCALKDNPGVYTKVCNYVDWIQNTI 243

  Fly   373 ASN 375
            |:|
Mouse   244 AAN 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 77/254 (30%)
Try4NP_035776.1 Tryp_SPc 24..242 CDD:238113 77/256 (30%)
Blue background indicates that the domain is not in the aligned region.

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