DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grass and CLIPB17

DIOPT Version :9

Sequence 1:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_321448.4 Gene:CLIPB17 / 1281525 VectorBaseID:AGAP001648 Length:467 Species:Anopheles gambiae


Alignment Length:355 Identity:103/355 - (29%)
Similarity:152/355 - (42%) Gaps:67/355 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CTTPDGDQGQCMPFSSCRTIEERLTEAQKAGQKVPADYASYLQKALCGEFNGVRHFCCPSANIQH 96
            ||..:|:.|..:|...|             |.:.|......:.:..|         |.|.|  |.
Mosquito   166 CTGANGEAGSLVPAVLC-------------GGQPPRPSKRSVDQRTC---------CVPPA--QP 206

  Fly    97 NSKVM--SLFKDENFDCGNF-LSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYI 158
            |..|.  :..|.....||.. |..::.:|...:....||||.|.|:|    :.:|.|.:|...|:
Mosquito   207 NRLVSHPNAAKLARLPCGTIGLLVKIQDGTYAQRGEFPWMANLVYKQ----KAICSGTLIHPSYV 267

  Fly   159 LTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVG--------IEKHLIHEKY 215
            |||.||::|   .|..:|||:|.:..:.:|          ||....|        :::..|.:| 
Mosquito   268 LTARHCING---GLVRVRLGKHDLLEKPEC----------PPGTTAGGVDCPQLQVQEIAIAQK- 318

  Fly   216 DARHIMHDIALLKLNRSVPFQ-KHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQ 279
             .|...||:.||:|.:..... :.::|||||:...|:.......|  :||||.||....:.|||:
Mosquito   319 -MRSHTHDVGLLRLAKPADVAGELVRPICLPVYASLRMYLPPSVT--ITGWGLTEKEKPATVLLK 380

  Fly   280 ANVP-LQPRSACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVS 343
            |:.. |....||::.|       .:|.||....:.|.||||||.||...|.|:  .:.|::||:|
Mosquito   381 AHTSLLMDDPACAKDY-------MICAGGTSHSNHCGGDSGGPYQALGVYDGK--SRYVQYGIIS 436

  Fly   344 QGVVTCGQISLPGLYTNVGEYVQWITDTMA 373
            .|...|.....|.....||..:.||.|.||
Mosquito   437 DGPAYCSNPDRPSRGVLVGYVMDWILDNMA 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grassNP_651543.1 CLIP 32..90 CDD:197829 10/57 (18%)
Tryp_SPc 121..371 CDD:238113 81/259 (31%)
CLIPB17XP_321448.4 Tryp_SPc 235..461 CDD:214473 79/255 (31%)
Tryp_SPc 235..461 CDD:238113 79/255 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BQ4K
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.770

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