DRSC/TRiP Functional Genomics Resources

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Protein Alignment grass and tmprss6

DIOPT Version :9

Sequence 1:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:409 Identity:112/409 - (27%)
Similarity:185/409 - (45%) Gaps:88/409 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 AIVSSMGVQSARADY--ADDCTTPDGD-----QGQCMPFSSCRTIEERLTEAQKAGQKVPADY-- 69
            |.::..|||::.:.|  :|.|   .|:     .|.|:|.  |..:::...|..:.....||.|  
 Frog   427 ASLTGPGVQASYSLYNQSDPC---PGEFLCAVNGLCVPL--CDGVKDCPNELDERNCVCPAQYHC 486

  Fly    70 ------------------------------ASYLQKALCGEFNGVRHFCCPSANIQH-NSKVMSL 103
                                          .:....|.||.||   :.|...:.:|. |::..|:
 Frog   487 PGAESCISITSVCDGKKDCANGTDEELCNQGANFPTAACGAFN---YKCADGSCVQKPNAECDSI 548

  Fly   104 F-----KDENFDCG---NFLSQRVSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILT 160
            .     .||| :||   ..:..|:..|.:.:....||.|.|:.:  ||  .:|||.::::::|||
 Frog   549 ADCPDGSDEN-NCGCGIQAVGIRLVGGTQAQEGEWPWQASLQVR--GE--HICGGTLVADQWILT 608

  Fly   161 AAHCV---HGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMH 222
            ||||.   .....:::.:.||:.|:|       :..:|:.|..|:.:     :||..||.....:
 Frog   609 AAHCFTPESYASPEVWTVYLGKVRLS-------RSTQKELAFKVIRL-----VIHPFYDEDSHDY 661

  Fly   223 DIALLKLNRSVPF-QKHIKPICLPITDELKEKAEQISTYFVTGWGTT-ENGSSSDVLLQANVPLQ 285
            |:||:.|:..||. ..|::|||||.:.......   |:.:|||||:. |||.:||||.:.::.|.
 Frog   662 DVALVLLDHLVPLTSPHVQPICLPSSTHHFPTG---SSCWVTGWGSVKENGPTSDVLQKVDIQLV 723

  Fly   286 PRSACSQAYRRAVPLSQLCVGGGD-LQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTC 349
            .:..|::.||..:....||.|..| .:|:|:||||.||.....     :.:..:.|:||.| ..|
 Frog   724 AQDICTELYRYQISPRMLCAGYRDGSKDACQGDSGSPLVCKTA-----SGRWFQAGLVSWG-AGC 782

  Fly   350 GQISLPGLYTNVGEYVQWI 368
            |.....|:|:.:...||||
 Frog   783 GIPRYFGVYSRITRLVQWI 801

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grassNP_651543.1 CLIP 32..90 CDD:197829 16/94 (17%)
Tryp_SPc 121..371 CDD:238113 81/254 (32%)
tmprss6XP_004913946.2 SEA 77..176 CDD:396113
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060 6/31 (19%)
LDLa 480..514 CDD:238060 3/33 (9%)
LDLa 525..560 CDD:238060 11/38 (29%)
Tryp_SPc 572..804 CDD:238113 81/255 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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