DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and PFA4

DIOPT Version :10

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_014640.1 Gene:PFA4 / 854159 SGDID:S000005363 Length:378 Species:Saccharomyces cerevisiae


Alignment Length:347 Identity:88/347 - (25%)
Similarity:140/347 - (40%) Gaps:80/347 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 ALTTSVVSI----AYWIGLPFWWAKSQLVTYFLLIVGNWLLLNVVFHYVMAVITPAGHPPEGVSL 132
            |:.|.::|.    |::..|..:.:..:.:|:...:...||      .|.:|:.|..|.|......
Yeast    13 AIPTFLISFIGYGAHYFILSNFLSVPKQITFEFCLSMIWL------SYYLAICTNPGRPLPNYKP 71

  Fly   133 VEAV--SMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYF--FLYMTYTTLGC 193
            ...:  :.|.||.:.||.|:|||..||:|:|.|||||||..||||:.|:.:|  ||:....|...
Yeast    72 PPDIWRNFCKKCQSYKPERSHHCKTCNQCVLMMDHHCPWTMNCVGFANYPHFLRFLFWIIVTTSV 136

  Fly   194 LFLI----LFGLEIGHKYLWLDHGENWTEIEPLEGQPVKFNLSGHIIPVTHPNEYDEFVLPPA-- 252
            ||.|    ::       ::|..           ...|..|.....:|.:|..:..:.|||...  
Yeast   137 LFCIQAKRIY-------FIWQQ-----------RHLPGYFFKKSELIFLTISSPLNSFVLLTITI 183

  Fly   253 --VHNLPTPIVDTDAASPGRRR-ALWFMAFTNVAVVLALGSLSIWHAKLIT---RGETSVEAHIN 311
              :..|...|::      ||.: ..|.|  ..:..:...|.|:   .|||.   |......:..|
Yeast   184 LFLRCLFNQILN------GRSQIESWDM--DRLESLFNSGRLT---QKLIDNTWRIYPESRSFQN 237

  Fly   312 EAERKRHLQQQRIYIN-----PYNFGTKKNWKLFLGLVRGRSFWRTVLLPSWHKPEG-------T 364
            :.:.:.||.::|...:     ||:|....|..|:||.:.   .|   |.| :..|.|       .
Yeast   238 KKDAEEHLTKKRPRFDELVNFPYDFDLYTNALLYLGPIH---LW---LWP-YGVPTGDGNNFPKN 295

  Fly   365 GLSFHTVNDAPFEDE-----WP 381
            |:|.:..|.: .||.     ||
Yeast   296 GISKYEANSS-LEDHILSLPWP 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 DHHC 139..>201 CDD:396215 32/67 (48%)
PFA4NP_014640.1 COG5273 1..344 CDD:227598 88/347 (25%)

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