DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and AT5G50020

DIOPT Version :10

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001190503.1 Gene:AT5G50020 / 835066 AraportID:AT5G50020 Length:444 Species:Arabidopsis thaliana


Alignment Length:327 Identity:76/327 - (23%)
Similarity:119/327 - (36%) Gaps:136/327 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 YFLLIVGNWLLLNVVFHYVMAVITPA---------GHPPE------------------------- 128
            :..|:.|   :|..||..::..:|.|         .||||                         
plant    93 HVFLVAG---VLFTVFVLILLFLTSARDPGIVPRNSHPPEEELCYDTTVSSDGRQTPTVQIPRTK 154

  Fly   129 -----GVSLVEAVSMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYFFLYMTY 188
                 |||:  .|..|..|:..:|||..||||||.|:.:.||||||:..|:|..|:||||::::.
plant   155 EVMVYGVSV--RVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGVRNYRYFFMFVSS 217

  Fly   189 TTLGCLFLILFGLEIGHKYLWLDHGENWTEIEPLEGQPVKFNLSGHIIPVTHPNEYDEFVLPPAV 253
            .|:.|:::                                |::|...|.|               
plant   218 ATILCIYI--------------------------------FSMSALYIKV--------------- 235

  Fly   254 HNLPTPIVDTDAASPGR--RRALWFMAFTNVAVVLAL---------GSLSIWHAKLITRGETSVE 307
                  ::|....:..|  |.:.|       ||:|.:         |.|:.:|..||:..:|:. 
plant   236 ------LMDNHQGTVWRAMRESPW-------AVMLMIYCFISLWFVGGLTGFHLYLISTNQTTY- 286

  Fly   308 AHINEAERKRHLQQQRIYINPYNFGTKKN-WKLFLGLVR-GRSFWRT----------VLLPSWHK 360
                  |..|:....|  ||.||.|...| ::.|...|: .|:.:|.          .|..:|.:
plant   287 ------ENFRYRSDNR--INVYNRGCSNNFFETFCSKVKPSRNDFRAFIKEEPPRNITLATTWER 343

  Fly   361 PE 362
            ||
plant   344 PE 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 DHHC 139..>201 CDD:396215 27/61 (44%)
AT5G50020NP_001190503.1 DHHC 166..291 CDD:396215 45/191 (24%)

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