DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5880 and AT3G51390

DIOPT Version :10

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_566950.1 Gene:AT3G51390 / 824302 AraportID:AT3G51390 Length:340 Species:Arabidopsis thaliana


Alignment Length:230 Identity:54/230 - (23%)
Similarity:90/230 - (39%) Gaps:84/230 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 TPAG------HPPEGVSLVEAVSMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNH 179
            ||.|      :|| |.|:....  ||.|...:||||.||..|:||:|:.||||.||..|:|..||
plant   143 TPWGKLVLDLYPP-GTSIRNLT--CGYCHVEQPPRTKHCHDCDRCVLQFDHHCVWLGTCIGQKNH 204

  Fly   180 RYFFLYMTYTTLGCLFLILFGLEIGHKYLWLDHGENWTEIEPLEGQPVKFNLSGHIIPVTHPNEY 244
            ..|:.|:...|..|::.::         :::|:..|                             
plant   205 SKFWWYICEETTLCIWTLI---------MYVDYLSN----------------------------- 231

  Fly   245 DEFVLPPAVHNLPTPIVDTDAASPGRRRALWFMAFTNVAVVLALG-----SLSIWHAKLITRGET 304
                                .|.|..:.|:..:    :.|:||:.     .|.|:|:.||...::
plant   232 --------------------VAKPWWKNAIIIL----LLVILAISLIFVLLLLIFHSYLILTNQS 272

  Fly   305 SVEAHINEAERKRHLQQQRIY---INPYNFGTKKN 336
            :.     |..|:|.:...|..   ::|::.|.::|
plant   273 TY-----ELVRRRRIPYMRNIPGRVHPFSRGIRRN 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 DHHC 139..>201 CDD:396215 27/61 (44%)
AT3G51390NP_566950.1 DHHC 164..>231 CDD:396215 28/75 (37%)

Return to query results.
Submit another query.