DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and zdhhc18a

DIOPT Version :10

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001071031.1 Gene:zdhhc18a / 564062 ZFINID:ZDB-GENE-060929-424 Length:467 Species:Danio rerio


Alignment Length:316 Identity:71/316 - (22%)
Similarity:111/316 - (35%) Gaps:101/316 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 NYTHCLGPFFVV---GVAALTTSVVSIA----YWIGLPFWWAKSQLV---TYFLLIVGNWLLLNV 111
            |..:|.|...:.   ||..||..::.|.    :....||      ||   |.|:.::|..|.:.|
Zfish    46 NRFYCDGRIMLARQCGVLPLTIGLIFITSVLFFTFDCPF------LVDHLTVFIPVIGGVLFIFV 104

  Fly   112 VFHYVMAVIT-----PAGHPPEGVSL--------------------------VEAVSMCGKCIAP 145
            |...:....|     |...|.|...:                          |..:..|..|...
Zfish   105 VISLLQTSFTDPGILPRALPDEAADIEKQIDNSGSSTYRPPPRTKEILINDQVVKLKYCFTCRMF 169

  Fly   146 KPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYFFLYMTYTTLGCLFLILFGLEIGHKYLWL 210
            :||||.|||:|:.|:.:.||||||:.||||..|:|:|:.::  .:|..|...:||..|.|..|..
Zfish   170 RPPRTSHCSLCDNCVERFDHHCPWVGNCVGKRNYRFFYAFI--VSLSFLTSFIFGCVITHLTLRS 232

  Fly   211 DHGENWTEIEPLEGQPVKFNLSGHIIPVTHPNEYDEFVLPPAVHNLPTPIVDTDAASPGRRRALW 275
            ..|..:.:                                 |:.:.|..:|:.            
Zfish   233 QGGNGFIQ---------------------------------AIQDSPASVVEL------------ 252

  Fly   276 FMAFTNVAVVLALGSLSIWHAKLITRGETSVEAHINEAERKRHLQQQRIYINPYNF 331
            .:.|.::..:|   .||.:|..|:....|:.|........||..:..    |||.:
Zfish   253 VICFFSIWSIL---GLSGFHTYLVASNLTTNEDIKGSWSSKRGEESG----NPYTY 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 DHHC 139..>201 CDD:396215 27/61 (44%)
zdhhc18aNP_001071031.1 DHHC 160..284 CDD:396215 43/173 (25%)

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