DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and Hip14

DIOPT Version :10

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_001261910.1 Gene:Hip14 / 39747 FlyBaseID:FBgn0259824 Length:655 Species:Drosophila melanogaster


Alignment Length:443 Identity:102/443 - (23%)
Similarity:156/443 - (35%) Gaps:131/443 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTRITWRGHSTQELLSIL-------RLRWSYMKHCWHSLTFNA----HMNSSYASDV----CLTP 50
            |.|:.....::|:..|:|       ||||..|..|..:..:.|    .:|:.|....    ||..
  Fly   268 MDRVKEAALTSQQRRSLLSKLRHDKRLRWWSMVACPFTAFYLAGIVFTVNTLYIIKFFLLGCLYS 332

  Fly    51 IFWFV-----DNYTHCLGPFFVVGVAALTTSVVSIAYWI-----GLPFWWAKSQLVTYFLLIVGN 105
            ||..:     |.:...|.|..|.    |.|.......|:     .:.|......|::..||    
  Fly   333 IFHTIGKALFDEHLMALLPLSVY----LATKAWFYVTWLMYIDDAVSFTATVCFLISSLLL---- 389

  Fly   106 WLLLNVVFHYVMAVITPAGH---------PPEGVSLVEAVSMCGKCIAPKPPRTHHCSICNRCIL 161
            |:.....:.....:|.|...         ...|....|..|.|..|:..:|.|:.|||:|:||:.
  Fly   390 WVCFLKSWKGDPGIIRPTREQRFKTIIELSERGGIGFEPASFCSGCLVRRPIRSKHCSVCDRCVA 454

  Fly   162 KMDHHCPWLNNCVGYGNHRYFFLYMTYTTLGCLFLILFGLEIGHKYLWLDHGENWTEIEPLEGQP 226
            :.||||||:.||:|..||.||..::....:.|.:: |:|   |.||.                  
  Fly   455 RFDHHCPWVGNCIGLKNHSYFMGFLWMLLIMCAWM-LYG---GSKYY------------------ 497

  Fly   227 VKFNLSGHIIPVTHPN-EYDEFVLPPAVHNLPTPIVDTDAASPGRRRAL--------WFM--AFT 280
                       |...| .:|:|:                    |..||:        |.|  |..
  Fly   498 -----------VNQCNVRFDDFL--------------------GAMRAIGNCDAWVGWVMGNALL 531

  Fly   281 NVAVVLALGSLSIWHAKLITRGETSVEAHINEAERKRHLQQQRIYINPYNFGTKKNWKLFL---- 341
            :::.|:.|.....:  ::|..|.|:.| .:|.. |.||.|.:..: :|:..|..:|...||    
  Fly   532 HMSWVILLTICQTY--QVICLGMTTNE-RMNRG-RYRHFQAKGGH-SPFTRGPIQNLVDFLECSC 591

  Fly   342 -GLVR-GRSFWRTVL--------------LPSWHKPEGTGLSFHTVNDAPFED 378
             |||: .|..|....              |.|...|:|.......|.|..:.|
  Fly   592 FGLVQPKRVDWMNYYDYDAQTHQTIEKEPLLSVDCPDGMAGDHQYVXDKTYRD 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 DHHC 139..>201 CDD:396215 25/61 (41%)
Hip14NP_001261910.1 ANKYR <52..246 CDD:440430
ANK repeat 77..108 CDD:293786
ANK repeat 110..142 CDD:293786
ANK repeat 144..175 CDD:293786
ANK repeat 177..209 CDD:293786
ANK repeat 212..244 CDD:293786
DHHC 426..559 CDD:396215 47/188 (25%)
Blue background indicates that the domain is not in the aligned region.

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