DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5880 and CG17287

DIOPT Version :10

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_611197.1 Gene:CG17287 / 36939 FlyBaseID:FBgn0034202 Length:338 Species:Drosophila melanogaster


Alignment Length:92 Identity:35/92 - (38%)
Similarity:53/92 - (57%) Gaps:5/92 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 VSMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYFFLYMTYTTLGCLFL---I 197
            |..|..|...||.|.|||..|:.|:|||||||||:.|||.:.|.:||.|::.|..:.|.:|   :
  Fly   124 VRYCKTCWIIKPDRAHHCRTCHMCVLKMDHHCPWIVNCVHFHNFKYFILFLFYAEVYCFYLFCVM 188

  Fly   198 LFGLEI--GHKYLWLDHGENWTEIEPL 222
            ::.|.:  |.:...|.:..:|..::.|
  Fly   189 VYDLYLICGFEVTALKNQHSWNILQYL 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 DHHC 139..>201 CDD:396215 29/64 (45%)
CG17287NP_611197.1 DHHC 125..243 CDD:396215 34/91 (37%)

Return to query results.
Submit another query.