DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5880 and dhhc-6

DIOPT Version :10

Sequence 1:NP_651539.3 Gene:CG5880 / 43268 FlyBaseID:FBgn0039489 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_502302.2 Gene:dhhc-6 / 178158 WormBaseID:WBGene00010892 Length:431 Species:Caenorhabditis elegans


Alignment Length:312 Identity:87/312 - (27%)
Similarity:131/312 - (41%) Gaps:80/312 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VAALTTSVVSIAYWIGLPFWWAKSQLVTYFL---LIVGNWLLLNVVFH---YVMAVITPAGHPPE 128
            :.|:||...  ..|:.:..:......:|:.|   |.:||  |.|..|.   ||     |.|..||
 Worm    42 IGAVTTFFA--LQWMPVTSYMGLFNTLTFLLWNYLTIGN--LFNASFFGPGYV-----PRGWRPE 97

  Fly   129 GVSLVEAVSMCGKCIAPKPPRTHHCSICNRCILKMDHHCPWLNNCVGYGNHRYFFLYMTYTTLGC 193
            ..:..:.:..|..|...|.||:||||.|:||.:||||||||:|||||:.||:||..::.::.:||
 Worm    98 NAADEKKLQFCVPCNGFKVPRSHHCSKCDRCCMKMDHHCPWINNCVGHRNHQYFLRFLFFSVVGC 162

  Fly   194 LF-LILFGLEIGHKYL--WLDHGENWTEIEPLEGQPVKFNLSGHIIPVTHPNEYDEFVLPPAVHN 255
            :. .|:.|..:.|...  |.....:.||                                |.:  
 Worm   163 IHSTIIDGSALYHAIFAGWYQKYGDGTE--------------------------------PII-- 193

  Fly   256 LPTPIVDTDAASPGRRRALWFMAFTNVAVVLALGSLSIWHAKLITRGETSVEAHINEAE---RKR 317
            |.|||...         ||.|.....:||.|||..|.|...:.:.|....:|.:|:...   ||.
 Worm   194 LLTPISFI---------ALVFAIAMAIAVALALTFLFITQLRYVIRNRNGIEDYIHGKSLNMRKV 249

  Fly   318 H----------LQQQRIYINPYNFGTKKNWK-LFLGLVRGR-----SFWRTV 353
            |          ::....:..||:.|.|:|.: :|:|:..||     ::|..|
 Worm   250 HEGDDEEEIEWIKSLGEWTYPYDLGWKRNLREVFIGIFDGRTRGNGTWWPVV 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5880NP_651539.3 DHHC 139..>201 CDD:396215 32/62 (52%)
dhhc-6NP_502302.2 DHHC 102..240 CDD:396215 54/180 (30%)

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