DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and sparcl2

DIOPT Version :10

Sequence 1:NP_651509.2 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_068070697.2 Gene:sparcl2 / 100534809 ZFINID:ZDB-GENE-131127-575 Length:259 Species:Danio rerio


Alignment Length:212 Identity:58/212 - (27%)
Similarity:95/212 - (44%) Gaps:42/212 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LCETMSCGA--GRICQMHDEK----PKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWC 142
            ||:.:.|.:  |..||:..|:    |||||...||.:   |..||:...:|:.::|.::::.|  
Zfish    47 LCQLLKCHSPIGSWCQVVKEEGVLTPKCVCPSTCPRQ---RAPVCSVLGKTYSNECLLHKEAC-- 106

  Fly   143 DSGEPGCTNPDNAHMHIDYYGAC-HEPRSCEGEDLKDFPRRMRDWLFNVMRDLAER-------DE 199
                     .....:...:.||| .....|..|:...||.|:.|| |.::..:.||       ..
Zfish   107 ---------RKKRRIGKAHNGACLVSETGCSEEEFGQFPYRLLDW-FLLLSRMGERYTPAAPSQS 161

  Fly   200 LTEHYMQMELEAETNNSRRWSNAAVWKWCDLDGDTDRSVSRHELFPIRAPLVSLEHCIAPFLESC 264
            ...|..:|:|             |..::..||.:.|..:||.:|..:....:.||||...|.:||
Zfish   162 CLSHTQRMQL-------------AQRRFVLLDRNRDGKLSRRDLRKLHYKRMPLEHCAQRFFQSC 213

  Fly   265 DSNKDHRITLVEWGACL 281
            |.|::.::||.||.:||
Zfish   214 DKNQNKKVTLREWTSCL 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_651509.2 FSL_SPARC 85..168 CDD:238649 22/89 (25%)
EFh_SPARC_like 171..285 CDD:320010 35/118 (30%)
EF-hand motif 219..251 CDD:320010 7/31 (23%)
EF-hand motif 253..285 CDD:320010 15/29 (52%)
sparcl2XP_068070697.2 None

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