DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tl and AT5G49140

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_199725.1 Gene:AT5G49140 / 834973 AraportID:AT5G49140 Length:980 Species:Arabidopsis thaliana


Alignment Length:588 Identity:105/588 - (17%)
Similarity:212/588 - (36%) Gaps:205/588 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 CSEMSIDGLCQCAPIMSEYEIICPANAENPTFRLTIQPKDYVQIMCNLTDTTDYQQLPK------ 92
            |.:.:::.||..|                  |:..:.|.|::.::..:.:.:.:  ||.      
plant   349 CRKTALEILCLYA------------------FKQNVAPDDFMDVVVEVAELSGH--LPLGLRVLG 393

  Fly    93 -----------KLRIGEV----------------DRVQMR--------RCMLPGHT-------PI 115
                       ||.:|.:                |.:.:|        .||..|..       .:
plant   394 SHMRGKSKDRWKLELGRLTTSLDEKVEKILKISYDDLHIRDKALFLHIACMFNGENIDLVKQMLV 458

  Fly   116 ASILDY---LGIVSPTTLIFESDN-----------LGMNITRQHLDRLHGLKRFRFTTRRLTHIP 166
            .|.||.   |.::...:||..:|:           :|..:..||... .|.::|.|.|:...:|.
plant   459 NSDLDVSLGLQLLLDKSLIQINDDREIVMHSLLLKMGKEVVCQHSSE-PGKRQFLFNTKETCNIL 522

  Fly   167 AN------LLTDMRNLSHLELRANIEEMPSHLFDDLENLESIEFGSNKLRQ-------MPRGIFG 218
            :|      :|....:.|.::   |...|...:|:|:.||:.:.|.:.|:.:       :|||: .
plant   523 SNNTGSEAVLGISLDTSEIQ---NDVFMSERVFEDMRNLKFLRFYNKKIDENPSLKLHLPRGL-N 583

  Fly   219 KMPKLKQLNLWSN-------------------QLHNLTKHDFEGATSVLGIDIHDNGIEQLPHDV 264
            .:|.::.|: |.:                   .:|:.....:||..::                 
plant   584 YLPAVRLLH-WDSYPMKYIPSQFRPECLVELRMMHSKVVKLWEGTQTL----------------- 630

  Fly   265 FAHLTNVTDINLSANLFRSLPQGLFDHNKHLN-EVRLMNNRVPLATLPSRLFANQPELQILRLR- 327
             |:|..: |::.|.||. .:|    |.:|.:: |...:.....||.|||.:. |...|:.|||. 
plant   631 -AYLKTI-DLSFSNNLV-EVP----DLSKAISLETLCLEGCQSLAELPSSVL-NLHRLKWLRLTM 687

  Fly   328 -AELQSLPGDLFEHSTQITNISLGDNLLKTLPATLLEHQVNLLSLDLSNNRLTHLPDSLFAHTTN 391
             .:|:.:|..:...|.::.::. |...||:.|    :...|:..:.:.|..:..:|.|:...:  
plant   688 CEKLEVIPLHINLASLEVLDME-GCLKLKSFP----DISKNIERIFMKNTGIEEIPPSISQWS-- 745

  Fly   392 LTDLRLEDNLLTG-ISGDIFSNLGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQP 455
                |||...::| ::..|||::...|..:             :::.:|:..|.....|:.    
plant   746 ----RLESLDISGCLNLKIFSHVPKSVVYI-------------YLTDSGIERLPDCIKDLT---- 789

  Fly   456 LLDIMLQTQINSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRELDLSYNNISSLGYEDLAFL 520
                           ::|             ::|.|....::.|.||..|...:|::..|.|..:
plant   790 ---------------WLH-------------YLYVDNCRKLVSLPELPSSIKILSAINCESLERI 826

  Fly   521 SQN 523
            |.:
plant   827 SSS 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 15/84 (18%)
leucine-rich repeat 176..198 CDD:275380 5/21 (24%)
leucine-rich repeat 199..222 CDD:275380 6/29 (21%)
LRR 222..576 CDD:443914 58/325 (18%)
leucine-rich repeat 223..270 CDD:275380 7/65 (11%)
leucine-rich repeat 271..294 CDD:275380 6/22 (27%)
leucine-rich repeat 295..320 CDD:275380 7/25 (28%)
leucine-rich repeat 321..343 CDD:275380 7/23 (30%)
leucine-rich repeat 344..367 CDD:275380 4/22 (18%)
leucine-rich repeat 368..391 CDD:275380 3/22 (14%)
leucine-rich repeat 392..415 CDD:275380 7/23 (30%)
leucine-rich repeat 416..439 CDD:275380 1/22 (5%)
leucine-rich repeat 440..474 CDD:275380 2/33 (6%)
leucine-rich repeat 475..498 CDD:275380 2/22 (9%)
leucine-rich repeat 499..520 CDD:275380 7/20 (35%)
leucine-rich repeat 523..552 CDD:275380 0/1 (0%)
LRRCT 561..619 CDD:214507
LRRNT 631..667 CDD:214470
PPP1R42 <660..752 CDD:455733
leucine-rich repeat 664..693 CDD:275380
leucine-rich repeat 694..715 CDD:275380
leucine-rich repeat 716..737 CDD:275380
LRRCT 751..800 CDD:214507
TIR 858..996 CDD:214587
AT5G49140NP_199725.1 PLN03210 13..979 CDD:215633 105/588 (18%)
leucine-rich repeat 558..587 CDD:275380 6/29 (21%)
leucine-rich repeat 588..609 CDD:275380 2/21 (10%)
leucine-rich repeat 610..629 CDD:275380 3/18 (17%)
leucine-rich repeat 633..655 CDD:275380 8/27 (30%)
leucine-rich repeat 656..679 CDD:275380 7/23 (30%)
leucine-rich repeat 680..702 CDD:275380 6/21 (29%)
leucine-rich repeat 703..723 CDD:275380 4/24 (17%)
leucine-rich repeat 724..746 CDD:275380 3/27 (11%)
leucine-rich repeat 747..767 CDD:275380 6/19 (32%)
leucine-rich repeat 768..790 CDD:275380 4/53 (8%)
Blue background indicates that the domain is not in the aligned region.

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