DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tl and AT5G41540

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_198969.1 Gene:AT5G41540 / 834156 AraportID:AT5G41540 Length:1038 Species:Arabidopsis thaliana


Alignment Length:945 Identity:179/945 - (18%)
Similarity:312/945 - (33%) Gaps:323/945 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 VSPTTLIFESDNLGMNITRQHLDRLHGLKRFRFTTRRLTHIPANLLTDMRNLSHLELRANIEEMP 189
            :.|:.:..:|.:.|....:..:.:...:|: |:|         |.||:..|:.        .|..
plant   106 IDPSDVRKQSGDFGKAFGKTCVGKTKEVKQ-RWT---------NALTEAANIG--------GEHS 152

  Fly   190 SHLFDDLENLESIEFG-SNKLRQMPRGIFGKM------------------PKLKQLNLW------ 229
            .:..|:.|.:|.|... ||||..:|...|.:|                  .::|.:.:|      
plant   153 LNWTDEAEMIEKIVADVSNKLNVIPSRDFEEMVGLDAHLRKLDSLLCLNSDEVKMIGIWGPAGIG 217

  Fly   230 ----SNQLHNLTKHDFE---------GATSVLGIDIHDNGIEQLPHDVFAHLTNVTDINLSANLF 281
                :..|:|....:|:         |:...:|:|.:|..: .|.:.:.:.:.|..|:..     
plant   218 KTTIARALYNQLSTNFQFKCFMGNLKGSYKSIGVDNYDWKL-NLQNQLLSKILNQNDVKT----- 276

  Fly   282 RSLPQGLFDH---------NKH----LNEVRLMNNRVPLATLP------SRLF------------ 315
                    ||         :|.    :::|..:...:.||..|      ||:.            
plant   277 --------DHLGGIKDWLEDKKVLIVIDDVDDLEQLLALAKEPSWFGSGSRIIVTTKDKTIMKTL 333

  Fly   316 -------------ANQPELQILRLRAELQSLPGDLFEHSTQITNISLGDNLLKTLPATL------ 361
                         .|:..|:||.|.|..:|.|.|.||...:......|:     ||..|      
plant   334 LVNDNNFYHVGYPTNKVALEILCLSAFQKSFPRDGFEELARKVAYLCGN-----LPLCLSVVGSS 393

  Fly   362 ----LEHQVNLLS--LDLSNNR------------LTHLPDSLFAHTT---NLTDLRLEDNLLTGI 405
                .:|:..|.|  |:.|.:|            |:.....||.|..   |.|.:.:...||...
plant   394 LRGQSKHRWKLQSDRLETSLDRKIEDVLKSAYEKLSKKEQVLFLHIACFFNNTYISVVKTLLADS 458

  Fly   406 SGDIFSNLGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLLD-----IMLQTQI 465
            :.|:             ||.|:|:..:..|        |:...|.....|||.     |:|: |.
plant   459 NLDV-------------RNGLKTLADKCLV--------HISRVDRIFMHPLLQQLGRYIVLE-QS 501

  Fly   466 NSP--------FGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLRELDLSYNNISSLGYEDLAFLSQ 522
            :.|        ...:..:|.......|::.:..|    |.::.|..:|.....::  .:|.||  
plant   502 DEPEKRQFLVEAEEIRDVLANETGTGSVLGISFD----MSKVSEFSISGRAFEAM--RNLRFL-- 558

  Fly   523 NRLHVNMTHNKIR-RIALPEDVHLGEGYNNNLVHVDLNDNPLVCDCTILWFIQLVRGVHKPQYSR 586
             |::...:..|:. ||                          |.|...|..::|:...|.|:.|.
plant   559 -RIYRRSSSKKVTLRI--------------------------VEDMKYLPRLRLLHWEHYPRKSL 596

  Fly   587 QFKLRTDRLVC-----SQPNVLEGTPVRQIEPQTLICPLDFSDDPRERKCPRGCNCHVRTYDKAL 646
            ..:.:.:|||.     |....|.|    .|:..|.:..:|.|...:.::.|...|  ....:...
plant   597 PRRFQPERLVVLHMPHSNLEKLWG----GIQSLTNLKNIDLSFSRKLKEIPNLSN--ATNLETLT 655

  Fly   647 VINCHSGNLTHVP-RLPNLHKNMQLMELHLE-------NNTLLRLPSANTPGYESVTSLHLAGNN 703
            :|.|.|  |..:| .:.||.|...||....:       |..|:.|...:......::|......|
plant   656 LIKCSS--LVELPSSISNLQKLKALMMFGCKMLKVVPTNINLVSLEKVSMTLCSQLSSFPDISRN 718

  Fly   704 LTSIDV-----DQLPTNLTHLDISWNHLQMLNATVLGFLNRTMKWRSVK-LSGNPWMCDCTAKPL 762
            :.|:||     :::|.::...   |:.|..|          :::.||:| |:..|     .:..:
plant   719 IKSLDVGKTKIEEVPPSVVKY---WSRLDQL----------SLECRSLKRLTYVP-----PSITM 765

  Fly   763 LLFTQDNFERIGDRNEMMCVNAEMPTRMVELSTNDICPAEKGVFIALAVVIALTG-------LLA 820
            |..:..:.|.|.|     ||     .|:..|.|..|....|        :::|.|       |.|
plant   766 LSLSFSDIETIPD-----CV-----IRLTRLRTLTIKCCRK--------LVSLPGLPPSLEFLCA 812

  Fly   821 GFTAAL--YYKFQTEIKIWLYAHNLLLWFVTEEDLDKDKKFDAFISYSHKDQSFIEDYLVPQLEH 883
            ....:|  .:.|...:|:.:: ||.|             |.|.....:.|.|. :|.|:      
plant   813 NHCRSLERVHSFHNPVKLLIF-HNCL-------------KLDEKARRAIKQQR-VEGYI------ 856

  Fly   884 GPQKFQLCVHERDWLVGGHIPENIMRSVADSRRTI 918
                         ||.|..:|.........:..||
plant   857 -------------WLPGKKVPAEFTHKATGNSITI 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 15/87 (17%)
leucine-rich repeat 176..198 CDD:275380 2/21 (10%)
leucine-rich repeat 199..222 CDD:275380 9/41 (22%)
LRR 222..576 CDD:443914 81/457 (18%)
leucine-rich repeat 223..270 CDD:275380 10/65 (15%)
leucine-rich repeat 271..294 CDD:275380 3/31 (10%)
leucine-rich repeat 295..320 CDD:275380 7/55 (13%)
leucine-rich repeat 321..343 CDD:275380 10/21 (48%)
leucine-rich repeat 344..367 CDD:275380 5/32 (16%)
leucine-rich repeat 368..391 CDD:275380 9/39 (23%)
leucine-rich repeat 392..415 CDD:275380 4/22 (18%)
leucine-rich repeat 416..439 CDD:275380 5/22 (23%)
leucine-rich repeat 440..474 CDD:275380 9/46 (20%)
leucine-rich repeat 475..498 CDD:275380 4/22 (18%)
leucine-rich repeat 499..520 CDD:275380 3/20 (15%)
leucine-rich repeat 523..552 CDD:275380 4/29 (14%)
LRRCT 561..619 CDD:214507 15/62 (24%)
LRRNT 631..667 CDD:214470 9/36 (25%)
PPP1R42 <660..752 CDD:455733 21/104 (20%)
leucine-rich repeat 664..693 CDD:275380 7/35 (20%)
leucine-rich repeat 694..715 CDD:275380 6/25 (24%)
leucine-rich repeat 716..737 CDD:275380 3/20 (15%)
LRRCT 751..800 CDD:214507 11/48 (23%)
TIR 858..996 CDD:214587 12/61 (20%)
AT5G41540NP_198969.1 PLN03210 1..984 CDD:215633 179/945 (19%)
leucine-rich repeat 555..582 CDD:275380 10/55 (18%)
leucine-rich repeat 583..602 CDD:275380 4/18 (22%)
leucine-rich repeat 605..627 CDD:275380 6/25 (24%)
leucine-rich repeat 628..650 CDD:275380 4/23 (17%)
leucine-rich repeat 651..674 CDD:275380 7/24 (29%)
leucine-rich repeat 675..697 CDD:275380 4/21 (19%)
leucine-rich repeat 698..718 CDD:275380 2/19 (11%)
leucine-rich repeat 719..742 CDD:275380 5/25 (20%)
leucine-rich repeat 764..785 CDD:275380 7/30 (23%)

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