DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tl and AT5G40910

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_198907.1 Gene:AT5G40910 / 834092 AraportID:AT5G40910 Length:1104 Species:Arabidopsis thaliana


Alignment Length:808 Identity:152/808 - (18%)
Similarity:273/808 - (33%) Gaps:252/808 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 QQLPKKLRIGEVDRVQMRRCMLPGHTPIASILDYLGIVSPTTLIFES------------------ 134
            :::...||:| .|::..|...|..|  ||...::..:...||::.:|                  
plant   407 RKIENVLRVG-YDKLSERHQSLFLH--IACFFNHKSVDYVTTMLADSTLDVENGLKTLAAKSLVS 468

  Fly   135 -----------DNLGMNITRQHLDRLHGLKRFRFTTRRLTHIPAN-------------------- 168
                       ..||..:..|..|  .|.::|....:.:..:.||                    
plant   469 TNGWITMHCLLQQLGRQVVVQQGD--PGKRQFLVEAKEIRDVLANETGTESVIGISFDISKIETL 531

  Fly   169 -----LLTDMRNLSHLELRANIEEMPSHLFDDLE---NLESIEFGSNKLRQMPRGI--------- 216
                 ....||||..|    |.......|.:|:|   .|..:.:||...:.:|...         
plant   532 SISKRAFNRMRNLKFL----NFYNGSVSLLEDMEYLPRLRLLYWGSYPRKSLPLTFKPECLVELY 592

  Fly   217 --FGKMPKLKQLNLWS--NQLHNLTKHDFEGATSVLGIDIHDNGIEQLPHDVFAHLTNVTDINLS 277
              |.|:.|     ||.  ..|.||.|.:       ||   :.:.::::|:  .:..||:..:.|:
plant   593 MGFSKLEK-----LWGGIQPLTNLKKIN-------LG---YSSNLKEIPN--LSKATNLKTLTLT 640

  Fly   278 -ANLFRSLPQGLFDHNKHLNEVRLMNNRVPLATLPSRLFANQPELQILRLR--AELQSLPGDLFE 339
             ......:|..:::..|  .|:...:..:.|..:|:.:  |...|:.:.:.  :.|:|.|    :
plant   641 GCESLVEIPSSIWNLQK--LEMLYASGCIKLQVIPTNI--NLASLEEVNMSNCSRLRSFP----D 697

  Fly   340 HSTQITNISLGDNLLKTLPATLLEHQVNLLSLDL---SNNRLTHLPDSLFAHTTNLTDLRLEDNL 401
            .|:.|..:.:...::|..||:::.|...|..|.:   |..||||:|:|:    |:| |||..|  
plant   698 ISSNIKRLYVAGTMIKEFPASIVGHWCRLDFLQIGSRSLKRLTHVPESV----THL-DLRNSD-- 755

  Fly   402 LTGISGDIFSNLGNLVTLVMSRNRLRTIDSRAFVSTNG----LRHLHLDHNDIDLQQ-------P 455
             ..:..|....|.:||:|::.       :....||..|    |..|..|| .|.|:.       |
plant   756 -IKMIPDCVIGLPHLVSLLVE-------NCTKLVSIQGHSPSLVTLFADH-CISLKSVCCSFHGP 811

  Fly   456 LLDIMLQTQINSPFGYMHGLLTLNLRNNSIIFVYNDWKNTMLQLREL--DLSYNNISSL------ 512
            :..:|           .:..|.|:..:...|...:..|:..|..:|:  :.::..|.:|      
plant   812 ISKLM-----------FYNCLKLDKESKRGIIQQSGNKSICLPGKEIPAEFTHQTIGNLITISLA 865

  Fly   513 -GYEDLAFLSQNRLHVNMTHNKIRRIALPEDVHLGEGYNNNLVHVDLNDNPLVCDCTILWFIQLV 576
             |.|: |:.:.:|....:..:.|:..|.            |.::..|....:....|.......|
plant   866 PGCEE-AYSTFSRFKACLLLSPIKNFAF------------NKINCFLRSKGVEISRTTESIYPFV 917

  Fly   577 RGVHKPQYSRQFKLRTDRLVCSQPNVLEGTPVRQIEPQTLICPLDFSDDPRERKCPRGCNCHVRT 641
            .|....::...|        |......|...:..:.|..::  .|||....|             
plant   918 SGGSLSEHLFIF--------CGDLFPEENRSLMDVTPNEIL--FDFSSSDVE------------- 959

  Fly   642 YDKALVINCHSGNLTHVPRLPNLHKNMQLMELHLENNTLLRLPSANTPGYESVTSLHLAGNNLTS 706
                 ::.|                           ...:.|.|....||     ....||....
plant   960 -----IVEC---------------------------GVKIFLSSGIEVGY-----CETGGNRNHH 987

  Fly   707 IDVDQLPTNLTHLDIS-----WNHLQMLNATVLGFLNRTMKWRSVKLSGNP--WMCDCTAKPLLL 764
            ||.:.....:|.::.|     |:.|:.|.   ||  .:.||....:||..|  ...|.|....:.
plant   988 IDGEAEAFKVTQVENSKHTGHWSWLRKLR---LG--KKKMKNNKTELSSRPVSGFSDLTRGIFIR 1047

  Fly   765 F--------TQDNFERIGDRNEMMCVNA 784
            :        |:|  |||.|.:.::|:.:
plant  1048 YQEPEAVELTKD--ERITDLSSLLCIGS 1073

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 17/74 (23%)
leucine-rich repeat 176..198 CDD:275380 6/24 (25%)
leucine-rich repeat 199..222 CDD:275380 6/33 (18%)
LRR 222..576 CDD:443914 77/381 (20%)
leucine-rich repeat 223..270 CDD:275380 9/48 (19%)
leucine-rich repeat 271..294 CDD:275380 2/23 (9%)
leucine-rich repeat 295..320 CDD:275380 4/24 (17%)
leucine-rich repeat 321..343 CDD:275380 5/23 (22%)
leucine-rich repeat 344..367 CDD:275380 5/22 (23%)
leucine-rich repeat 368..391 CDD:275380 9/25 (36%)
leucine-rich repeat 392..415 CDD:275380 7/22 (32%)
leucine-rich repeat 416..439 CDD:275380 5/22 (23%)
leucine-rich repeat 440..474 CDD:275380 8/40 (20%)
leucine-rich repeat 475..498 CDD:275380 4/22 (18%)
leucine-rich repeat 499..520 CDD:275380 6/29 (21%)
leucine-rich repeat 523..552 CDD:275380 3/28 (11%)
LRRCT 561..619 CDD:214507 7/57 (12%)
LRRNT 631..667 CDD:214470 1/35 (3%)
PPP1R42 <660..752 CDD:455733 19/96 (20%)
leucine-rich repeat 664..693 CDD:275380 4/28 (14%)
leucine-rich repeat 694..715 CDD:275380 4/20 (20%)
leucine-rich repeat 716..737 CDD:275380 7/25 (28%)
LRRCT 751..800 CDD:214507 10/44 (23%)
TIR 858..996 CDD:214587
AT5G40910NP_198907.1 PLN03210 1..968 CDD:215633 123/689 (18%)
leucine-rich repeat 544..565 CDD:275380 6/24 (25%)
leucine-rich repeat 588..610 CDD:275380 6/26 (23%)
leucine-rich repeat 611..633 CDD:275380 5/33 (15%)
leucine-rich repeat 634..657 CDD:275380 2/22 (9%)
leucine-rich repeat 658..680 CDD:275380 4/23 (17%)
leucine-rich repeat 681..701 CDD:275380 5/23 (22%)
leucine-rich repeat 702..728 CDD:275380 6/25 (24%)
leucine-rich repeat 746..768 CDD:275380 8/29 (28%)
leucine-rich repeat 769..789 CDD:275380 6/26 (23%)
Blue background indicates that the domain is not in the aligned region.

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