DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tl and cDIP

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:NP_650951.1 Gene:cDIP / 42512 FlyBaseID:FBgn0038865 Length:554 Species:Drosophila melanogaster


Alignment Length:540 Identity:120/540 - (22%)
Similarity:187/540 - (34%) Gaps:188/540 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CAPIMSEYEII-----------CPANAENPTFRLTI--QPKDYVQIMCNLTDTTDYQ-------- 88
            |.|.:..|.:|           ..|:.::.:.|:.:  ..:.:.|....:|....::        
  Fly     6 CLPFLCSYLLISLAATATTDEDADADVDSGSSRIVLVSSLEGHCQTEGKVTSCRGFEFAGEDEKA 70

  Fly    89 --QLPKKLRIGEVDRVQMRRCMLPGHTPIASILDYLGIVSPTTLIFESDNLGMNITRQHLDRLHG 151
              .||.::||.|           .|.|......::     ..|||||      |.|         
  Fly    71 TFDLPTEVRIAE-----------DGTTYEVGDEEH-----SRTLIFE------NCT--------- 104

  Fly   152 LKRFRFTTRRLTHIPANLLTDMRNLSHLELRA--------------------------NIEEMPS 190
                      .|:.|..|...: .:|.|::|.                          :||.:|:
  Fly   105 ----------FTNFPLRLFYTL-EVSELDMRGCGIRFIYWENFSIGADKLVILLLSDNHIEVLPT 158

  Fly   191 HLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLWSNQLHNLTKHDFEGATSVLGIDIHDN 255
            ..|....|||.|....|||.::..|.|..:.||:.|                        |:.:|
  Fly   159 KTFRGAGNLEFIFLNRNKLGKLQAGAFDNLLKLQYL------------------------DLTEN 199

  Fly   256 GIEQLPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLNEVRLMNNRVPLATLPSRLF----- 315
            .:|.|..||||.|.::..:.|:.|...::...||.||..|..|.:.|||  |..:....|     
  Fly   200 RLEALAADVFAGLKSLRHVGLAGNQLTTIESDLFAHNPDLLSVAMQNNR--LREVGEYAFRSRGR 262

  Fly   316 ---------ANQPELQILRLRAELQSLPG-----DLFEHSTQITNISLGDNLLKTL--PAT-LLE 363
                     :|.|||.:|.|.....:|..     |.......:||:.|.||.::.|  ||: .||
  Fly   263 HHQMQYVDLSNNPELVVLLLNINATNLTARNCSLDRVNLYGSVTNVDLSDNRVRELYFPASEALE 327

  Fly   364 HQV----------------NLLSLDLSNN-RLTHLPDS--------LFAHTTNLTDLRLEDNLLT 403
            |.|                .|..||:::| .|..|||.        |....|...:|.||  .|.
  Fly   328 HLVLRNNSLVQLASLSRVPRLRHLDVADNPNLGQLPDGWRTPHLEMLVLRNTGQMELPLE--ALQ 390

  Fly   404 GISGDIFSNLGNLVTLVMSRNRLRTIDSRAFVSTNGLRHLHLDHND---IDLQQPLLDIMLQT-- 463
            |:.        ||..|.:|.|.|..||..||.:...|.|.::..|:   ..|:. ::|::::.  
  Fly   391 GMQ--------NLQKLDISGNNLTEIDPSAFPTLTQLTHFYIHGNNWNCFSLRN-IMDVLIRANG 446

  Fly   464 --------QINSPFGYMHGL 475
                    ..:.|..|.||:
  Fly   447 IAYTVDNYDPDFPGEYFHGI 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 19/84 (23%)
leucine-rich repeat 176..198 CDD:275380 7/47 (15%)
leucine-rich repeat 199..222 CDD:275380 8/22 (36%)
LRR 222..576 CDD:443914 79/314 (25%)
leucine-rich repeat 223..270 CDD:275380 11/46 (24%)
leucine-rich repeat 271..294 CDD:275380 6/22 (27%)
leucine-rich repeat 295..320 CDD:275380 8/38 (21%)
leucine-rich repeat 321..343 CDD:275380 5/26 (19%)
leucine-rich repeat 344..367 CDD:275380 12/41 (29%)
leucine-rich repeat 368..391 CDD:275380 9/31 (29%)
leucine-rich repeat 392..415 CDD:275380 5/22 (23%)
leucine-rich repeat 416..439 CDD:275380 9/22 (41%)
leucine-rich repeat 440..474 CDD:275380 7/46 (15%)
leucine-rich repeat 475..498 CDD:275380 0/1 (0%)
leucine-rich repeat 499..520 CDD:275380
leucine-rich repeat 523..552 CDD:275380
LRRCT 561..619 CDD:214507
LRRNT 631..667 CDD:214470
PPP1R42 <660..752 CDD:455733
leucine-rich repeat 664..693 CDD:275380
leucine-rich repeat 694..715 CDD:275380
leucine-rich repeat 716..737 CDD:275380
LRRCT 751..800 CDD:214507
TIR 858..996 CDD:214587
cDIPNP_650951.1 LRR 107..>410 CDD:443914 85/339 (25%)
leucine-rich repeat 118..142 CDD:275380 3/23 (13%)
leucine-rich repeat 143..166 CDD:275380 4/22 (18%)
leucine-rich repeat 167..190 CDD:275380 8/22 (36%)
leucine-rich repeat 191..214 CDD:275380 11/46 (24%)
leucine-rich repeat 215..238 CDD:275380 6/22 (27%)
leucine-rich repeat 239..265 CDD:275380 7/27 (26%)
leucine-rich repeat 266..325 CDD:275380 16/58 (28%)
leucine-rich repeat 326..347 CDD:275380 4/20 (20%)
leucine-rich repeat 348..394 CDD:275380 15/55 (27%)
leucine-rich repeat 395..418 CDD:275380 9/22 (41%)
Blue background indicates that the domain is not in the aligned region.

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