DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tl and Tlr7

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_017457568.1 Gene:Tlr7 / 317468 RGDID:1563357 Length:1068 Species:Rattus norvegicus


Alignment Length:1067 Identity:242/1067 - (22%)
Similarity:435/1067 - (40%) Gaps:267/1067 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 PTTLIFESDN--LGMNITRQHLDRL-HGLKRFRFTTRRLT----HIPANLLTDMRNLSHLE---L 181
            |..:..:|.|  :.::.|.:||..: .|:..   .|..||    |||:........|.|||   |
  Rat    53 PCDVSLDSTNTHVIVDCTDKHLTEIPEGIPT---NTTNLTLTINHIPSISPDSFHRLKHLEELDL 114

  Fly   182 RAN----------------IEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLWS 230
            |.|                ::..|.. |..|.:|:|:....|:|.::|:.:   ...|:.|:|.:
  Rat   115 RCNCVPILLGSKANVCTKRLQIRPGS-FSGLSDLKSLYLDGNQLLEIPQDL---PSSLQLLSLEA 175

  Fly   231 NQLHNLTKHDFEGATSVLGIDIHDNGIEQLP--------HDVFAHLTNVTDINLSANLFRSLPQG 287
            |.:.::||.:.....::..:.:..|...:.|        .|.|..:.|:..::|..|...::|..
  Rat   176 NNIFSITKENLSELVNIESLYLGQNCYYRNPCNVSYSIEKDAFLVMKNLKVLSLKDNNVTAVPTI 240

  Fly   288 L-------------------FDHNKHLNEVRLMN-------------------NRVPLATLPSRL 314
            |                   .|.|| |:::::::                   |..|| .:....
  Rat   241 LPPNLLELYLYNNIIKRIQEHDFNK-LSQLQVLDLSGNCPRCYNVPYPCTPCENNSPL-QIHDNA 303

  Fly   315 FANQPELQILRLRA-ELQSLPGDLFEHSTQITNISLGDNLL--KTLPATLLEHQVNLLSLDLSNN 376
            |.:..||::|||.: .||.:|.:.|::.:.:..:.|..|.|  :...|..|....||:.||||.|
  Rat   304 FDSLTELKVLRLHSNSLQHVPAEWFKNMSNLQELDLSQNYLAREIEEAKFLNSLPNLVQLDLSFN 368

  Fly   377 ---RLTH----LPDSLFAHTTNLTDLR-----------LEDNLLTGISGDIFSNLGNLVTLVMSR 423
               ::.|    ||.||    ::||.|:           |:|:.|:     :..||.||..|.:..
  Rat   369 YELQVYHASITLPHSL----SSLTKLKNLYIKGYVFKELKDSSLS-----VLHNLSNLEVLDLGT 424

  Fly   424 NRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLLDIML----QTQINSPFGYMHGLLTLNLRNNS 484
            |.::..|...|.....|:.:.|..|.|...:...::.|    ||.::     .||...|...:  
  Rat   425 NFIKIADLNIFQQFENLKFIDLSVNKISPSEESREVGLCPNAQTSVD-----WHGPQVLEALH-- 482

  Fly   485 IIFVYNDW------KN----TMLQL--------RELDLSYNNISSL---GYEDLAF-----LSQN 523
             .|.|:::      ||    |.|.|        :.||||.|||..:   .::.|:|     ||.|
  Rat   483 -YFRYDEYARSCRFKNKEPPTFLPLNADCHTYGKTLDLSRNNIFFIKPSDFKHLSFLKCLNLSGN 546

  Fly   524 RLHVNMTHNKIRRIALPEDVHLGEGYNN--------------NLVHVDLNDNPLVCDCTILWFIQ 574
            .:...:..::::.:   .::...:..||              ||..:||:.|.        .:.|
  Rat   547 AIGQTLNGSELQPL---RELRYLDFSNNRLDLLYSTAFEELQNLEILDLSSNS--------HYFQ 600

  Fly   575 LVRGVHKPQYSRQFKLRTDRLVCSQPNVLEGTPVRQIEPQTLICPLDFSDDPRERKCPRGCNCHV 639
            .....|...:::  |||....:....|.:..:..|.:|.::|.. |:|..:..:.....|.|.::
  Rat   601 AEGITHMLNFTK--KLRHLEKLMMNDNDISTSASRTMESESLRV-LEFRGNHLDVLWRDGDNRYL 662

  Fly   640 RTYDKAL---VINCHSGNLTHVP------RLPN-----LHKN---------MQLMELHLEN---- 677
            ..:...|   .::....:|..||      ..||     |.||         :||:: ||:|    
  Rat   663 DFFKNLLNLEELDISRNSLNSVPPGVFEGMPPNLTTLSLAKNGLRSFSWGRLQLLK-HLKNLDLS 726

  Fly   678 -NTLLRLPSANTPGYESVTSLHLAGNNLTSID----VDQLPTNLTHLDISWNHLQMLNAT----- 732
             |.|..:|:......:|:|.|.|..|.:..:.    .|.|  .|.:||||.|.:|::..|     
  Rat   727 HNQLTTVPARLANCSKSLTKLILNHNQIRQLTKYFLEDAL--QLRYLDISSNKIQVIQKTSFPEN 789

  Fly   733 VLGFLNRTMKWRSVKLSGNPWMCDCTAKPLL------------LFTQDNFERIGDRNEMMCVNAE 785
            ||..||..:      |..|.::|:|.|...:            |.|.......|.......::.:
  Rat   790 VLNNLNMLL------LHHNRFLCNCDAVWFVWWVNHTDVTIPYLATDVTCAGPGAHKGQSVISLD 848

  Fly   786 MPTRMVELSTNDICPAEKGVFIALAVVIALTGLLAGFTAALYYKFQTEIKIWLYAHNLLLWFVTE 850
            :.|..::|:...:........:.|.:|:..:.|.......:||.::.:||.:.:..::       
  Rat   849 LYTCELDLTNLILFSVSISSVLFLMIVMTTSHLFFWDMWYIYYFWKAKIKGYQHLQSM------- 906

  Fly   851 EDLDKDKKFDAFISYSHKDQSFIE---DYLVPQLEHGPQK-FQLCVHERDWLVGGHIPENIMRSV 911
                 :..:||||.|..|:.:..|   ..||.:||...:| |.||:.|||||.|..:.||:.:|:
  Rat   907 -----ESCYDAFIVYDTKNSAVTEWVLQELVVKLEDPREKHFNLCLEERDWLPGQPVLENLSQSI 966

  Fly   912 ADSRRTIIVLSQNFIKSEWARLEFRAAHRSALNEGRSRIIVIIYSDIGDVEK-LDE----ELKAY 971
            ..||:|:.|::|.:.|:|..::.|..:|:..::| :..:|::|:     :|| |.:    :|:..
  Rat   967 QLSRKTVFVMTQKYAKTESFKMAFYLSHQRLMDE-KVDVIILIF-----LEKPLQKSKFLQLRKR 1025

  Fly   972 LKMNTYLKW-----GDPWFWDKLRFAL 993
            |..::.|:|     ..|:||..|:.||
  Rat  1026 LCSSSVLEWPTNPQAHPYFWQCLKNAL 1052

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 19/77 (25%)
leucine-rich repeat 176..198 CDD:275380 10/40 (25%)
leucine-rich repeat 199..222 CDD:275380 5/22 (23%)
LRR 222..576 CDD:443914 100/464 (22%)
leucine-rich repeat 223..270 CDD:275380 10/54 (19%)
leucine-rich repeat 271..294 CDD:275380 6/41 (15%)
leucine-rich repeat 295..320 CDD:275380 5/43 (12%)
leucine-rich repeat 321..343 CDD:275380 8/22 (36%)
leucine-rich repeat 344..367 CDD:275380 5/24 (21%)
leucine-rich repeat 368..391 CDD:275380 11/29 (38%)
leucine-rich repeat 392..415 CDD:275380 8/33 (24%)
leucine-rich repeat 416..439 CDD:275380 5/22 (23%)
leucine-rich repeat 440..474 CDD:275380 7/37 (19%)
leucine-rich repeat 475..498 CDD:275380 6/32 (19%)
leucine-rich repeat 499..520 CDD:275380 10/36 (28%)
leucine-rich repeat 523..552 CDD:275380 3/42 (7%)
LRRCT 561..619 CDD:214507 10/57 (18%)
LRRNT 631..667 CDD:214470 9/49 (18%)
PPP1R42 <660..752 CDD:455733 33/119 (28%)
leucine-rich repeat 664..693 CDD:275380 11/42 (26%)
leucine-rich repeat 694..715 CDD:275380 6/24 (25%)
leucine-rich repeat 716..737 CDD:275380 10/25 (40%)
LRRCT 751..800 CDD:214507 9/60 (15%)
TIR 858..996 CDD:214587 49/150 (33%)
Tlr7XP_017457568.1 leucine-rich repeat 66..87 CDD:275380 5/23 (22%)
LRR_8 93..157 CDD:404697 16/64 (25%)
leucine-rich repeat 109..146 CDD:275380 8/37 (22%)
LRR 142..>452 CDD:443914 72/323 (22%)
leucine-rich repeat 147..191 CDD:275380 11/46 (24%)
leucine-rich repeat 192..223 CDD:275380 4/30 (13%)
PLN00113 208..>752 CDD:215061 125/577 (22%)
leucine-rich repeat 224..244 CDD:275380 4/19 (21%)
leucine-rich repeat 245..268 CDD:275380 4/23 (17%)
leucine-rich repeat 269..309 CDD:275380 4/40 (10%)
leucine-rich repeat 310..333 CDD:275380 8/22 (36%)
leucine-rich repeat 334..359 CDD:275380 5/24 (21%)
leucine-rich repeat 370..389 CDD:275380 6/22 (27%)
leucine-rich repeat 390..416 CDD:275380 6/30 (20%)
leucine-rich repeat 417..440 CDD:275380 5/22 (23%)
leucine-rich repeat 515..537 CDD:275380 8/21 (38%)
leucine-rich repeat 538..562 CDD:275380 3/26 (12%)
leucine-rich repeat 563..586 CDD:275380 2/22 (9%)
leucine-rich repeat 587..616 CDD:275380 8/38 (21%)
leucine-rich repeat 617..639 CDD:275380 3/21 (14%)
leucine-rich repeat 640..670 CDD:275380 5/30 (17%)
leucine-rich repeat 671..695 CDD:275380 3/23 (13%)
leucine-rich repeat 696..719 CDD:275380 5/23 (22%)
leucine-rich repeat 720..743 CDD:275380 5/22 (23%)
LRR_8 743..>786 CDD:404697 15/44 (34%)
leucine-rich repeat 768..786 CDD:275380 8/17 (47%)
TIR 909..1054 CDD:214587 49/150 (33%)

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