DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tl and tlr12

DIOPT Version :10

Sequence 1:NP_001262995.1 Gene:Tl / 43222 FlyBaseID:FBgn0262473 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_002941870.2 Gene:tlr12 / 100498493 XenbaseID:XB-GENE-5824069 Length:936 Species:Xenopus tropicalis


Alignment Length:965 Identity:214/965 - (22%)
Similarity:360/965 - (37%) Gaps:261/965 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 THIPANLLTDMRNLSHLELRANIEEMPSHLFDDLENLESIE---FGSNKLRQM--PRGIFGKMPK 222
            |.||.....:.:.:.:|.::..:..:..:.|..||:|||:.   .|.:|...:  |...|..:..
 Frog    93 TFIPGGTFANFKRIKYLFMKMPLVRIYPNAFKGLESLESLAISFLGHSKCNNLSIPTDAFSNLYY 157

  Fly   223 LKQLNL--------------WSNQLHNLTK------------HDFEGATSVLGIDIHDNGIEQ-- 259
            |:.|::              :|..|::|:.            |.|:....:..:|:..|.||:  
 Frog   158 LRDLSIEGFKLVKSMLIHLPFSTSLYSLSLPTNCITDLFHVFHIFQNLIFIHNLDVGSNKIERVS 222

  Fly   260 LPHDVFAHLTNVTDINLSANLFRSLPQGLFDHNKHLN-EVRLMNNRVPLATLPSRLFANQPELQI 323
            |.||:...|.|:|::.|..|     |..|...|.... .:.|:|.......|...|.|....|:.
 Frog   223 LQHDLNISLPNITELVLEKN-----PLILIQQNALARFGIHLLNLGFTKLNLEDILNAGVENLKS 282

  Fly   324 LRL-------------------RAELQSLPGDLFEHSTQITNISLGDNLLKTLPATLLEHQVNLL 369
            |.|                   |.:|:||...:...|...|...||.:.|:.|  .|..:.::::
 Frog   283 LSLTSACRRAINKTHTLCSIAQRFQLKSLSAPVNRFSGIYTKDFLGCSSLEFL--NLNHNHIHIV 345

  Fly   370 SLDLSNNRLTHLPDSLFAHTT------NLTDLRLEDNLLTGISGDIFSNLGNLVT---------- 418
            ..||    |..||.....|.:      ||..|..:||..:.:....|  :||.:|          
 Frog   346 DPDL----LYTLPKLKELHLSYSLLHMNLCPLSYQDNFTSSVEALYF--IGNRITVLKNKQFFCM 404

  Fly   419 -----LVMSRNRLRTIDSRAFVSTNGLRHLHLDHNDIDLQQPLLDIMLQTQINSPFGYMHGLLTL 478
                 |:::||.:..|:..||...|.||.|.|.:|.          :...||:|..| :..|:.|
 Frog   405 TKLTDLLLARNGIEHIEESAFWGLNDLRVLDLRNNR----------LTSLQISSLSG-LSNLMEL 458

  Fly   479 NLRNNSIIFVYNDWKNTMLQLRELDLSYNNISSLGYEDLAFLSQNRLHVNMTHNKIRRIALPEDV 543
            .|:||.:..:.........:||.:.:.:.:: |:.:|  .|.:...|.:..|...|       .|
 Frog   459 YLQNNVMESMQRYSLKWQTKLRLVKIGFVSV-SVSFE--LFPNTETLDIQTTGKYI-------TV 513

  Fly   544 HLGEGYNNNLVHVDLNDNPLVCDCTILWFIQLVRGVHKPQYSRQFKLRTDRLVCSQPNVLEGTPV 608
            .:.|...::|..:.:|.:.:..|                                          
 Frog   514 FMNETAASSLKSLSVNGSHVELD------------------------------------------ 536

  Fly   609 RQIEPQTLICPLDFSDDPRERKCPRGCNCHVRTYDKALVINC-HSG-NLTHVPRLPNLHKNMQLM 671
                   :.|...|....||          ::..:...:|:| |.| .|.|...|.|:       
 Frog   537 -------IKCGHQFFSTLRE----------LKVINNNGLISCSHYGYQLEHFENLENI------- 577

  Fly   672 ELHLENNTLLRLPSANTPGYESVTSLHLAGNNLTSIDVDQLPTNLTHLDISWNHLQMLNATVLGF 736
            :.|.....|.|  :.|.....::.||.:. |..|::|.:..|.:|.|   ..:.|::|.....||
 Frog   578 QYHFSGAPLTR--NVNFSNIANLRSLEVE-NLATALDPNVPPNDLFH---KLHKLEVLKLFNCGF 636

  Fly   737 LNRT----MKWRSVK---------LSGNP------------------WMCDCTAKPLLLFT-QDN 769
            ...|    ...||::         |:.:|                  :.|||.....:.:. :|.
 Frog   637 KYMTTALLKDMRSLRVLVMKNQMILAVDPGLQNTLSPLEFIYFIDVTFQCDCDNSWFVTWALEDK 701

  Fly   770 FERIGDRNEMMCVNAEMPTRMVELSTNDICPAEKG------VFIALAVVIALTGLLAGFTA---A 825
            ...:.....:.|:.......:|..|.:. |..|..      .|.:|.:.|.||.|...|.:   .
 Frog   702 HTFVSGICSLFCLQLNKKFNLVNFSESS-CRQEIDFMLFVITFTSLLLFIVLTMLCNIFNSDIIQ 765

  Fly   826 LYYKFQTEIKIWL-----YAHNLLLWFVTEEDLDKDKKFDAFISYSHKDQSFIEDYLVPQLEH-G 884
            |:|.||    |||     ..:|.:.:           ::|||:||..:||.::.:||||.||. |
 Frog   766 LFYVFQ----IWLKKLRGKTNNPIAY-----------EYDAFVSYCSRDQGWVVNYLVPNLEEKG 815

  Fly   885 PQKFQLCVHERDWLVGGHIPENIMRSVADSRRTIIVLSQNFIKSEWARLEFRAAHRSALNEGRSR 949
            ....:||:|.||:|||..|.:|||.|:..||:||.::|.|:::|:|..||.|.|....|.|....
 Frog   816 RNTIKLCLHNRDFLVGKDIVDNIMDSIYKSRKTICLISYNYLQSDWCSLEMRMATYKLLAEKNDD 880

  Fly   950 IIVIIYSDIGDVEKLDEELKAY------LKMNTYLKW-----GDPWFWDKLRFAL 993
            :|::....|...     .|.||      ::..||:.|     ....||::||..:
 Frog   881 LILVFLESISGY-----HLSAYHRLARIVRKKTYIDWPQEENEQAEFWERLRMTV 930

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TlNP_001262995.1 LRR_8 174..233 CDD:404697 14/77 (18%)
leucine-rich repeat 176..198 CDD:275380 3/21 (14%)
leucine-rich repeat 199..222 CDD:275380 7/27 (26%)
LRR 222..576 CDD:443914 90/422 (21%)
leucine-rich repeat 223..270 CDD:275380 15/74 (20%)
leucine-rich repeat 271..294 CDD:275380 6/22 (27%)
leucine-rich repeat 295..320 CDD:275380 5/25 (20%)
leucine-rich repeat 321..343 CDD:275380 8/40 (20%)
leucine-rich repeat 344..367 CDD:275380 6/22 (27%)
leucine-rich repeat 368..391 CDD:275380 6/28 (21%)
leucine-rich repeat 392..415 CDD:275380 5/22 (23%)
leucine-rich repeat 416..439 CDD:275380 7/37 (19%)
leucine-rich repeat 440..474 CDD:275380 9/33 (27%)
leucine-rich repeat 475..498 CDD:275380 5/22 (23%)
leucine-rich repeat 499..520 CDD:275380 4/20 (20%)
leucine-rich repeat 523..552 CDD:275380 5/28 (18%)
LRRCT 561..619 CDD:214507 1/57 (2%)
LRRNT 631..667 CDD:214470 8/37 (22%)
PPP1R42 <660..752 CDD:455733 22/104 (21%)
leucine-rich repeat 664..693 CDD:275380 4/28 (14%)
leucine-rich repeat 694..715 CDD:275380 6/20 (30%)
leucine-rich repeat 716..737 CDD:275380 5/20 (25%)
LRRCT 751..800 CDD:214507 8/67 (12%)
TIR 858..996 CDD:214587 53/148 (36%)
tlr12XP_002941870.2 leucine-rich repeat 60..82 CDD:275380
leucine-rich repeat 83..105 CDD:275380 3/11 (27%)
leucine-rich repeat 106..128 CDD:275380 3/21 (14%)
leucine-rich repeat 182..207 CDD:275380 4/24 (17%)
leucine-rich repeat 208..233 CDD:275380 8/24 (33%)
LRR 226..633 CDD:443914 103/512 (20%)
leucine-rich repeat 234..279 CDD:275380 11/49 (22%)
leucine-rich repeat 308..331 CDD:275380 7/22 (32%)
leucine-rich repeat 332..355 CDD:275380 7/28 (25%)
leucine-rich repeat 356..382 CDD:275380 6/25 (24%)
leucine-rich repeat 383..406 CDD:275380 4/24 (17%)
leucine-rich repeat 407..430 CDD:275380 6/22 (27%)
leucine-rich repeat 431..454 CDD:275380 9/33 (27%)
leucine-rich repeat 455..478 CDD:275380 5/22 (23%)
TIR 788..930 CDD:214587 53/146 (36%)
Blue background indicates that the domain is not in the aligned region.

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